Index

A

About (class in gui.core.About) AboutQT (class in gui.core.AboutQt) addSubmodel_pushed() (gui.core.SubmodelBlend.SubmodelBlend method) addWidget() (gui.core.MainWindow.MainWindow method) admm_ds (class in libpyhat.transform.cal_tran) AirPLS (class in libpyhat.transform.baseline_code.airpls) airpls_baseline() (in module libpyhat.transform.baseline_code.airpls) ALS (class in libpyhat.transform.baseline_code.als) als_baseline() (in module libpyhat.transform.baseline_code.als)

apply_transform() (libpyhat.transform.cal_tran.admm_ds method) (libpyhat.transform.cal_tran.cal_tran method) (libpyhat.transform.cal_tran.cca method) (libpyhat.transform.cal_tran.ds method) (libpyhat.transform.cal_tran.forward_backward_ds method) (libpyhat.transform.cal_tran.ipd_ds method) (libpyhat.transform.cal_tran.no_transform method) (libpyhat.transform.cal_tran.piecewise_ds method) (libpyhat.transform.cal_tran.ratio method) array_in_array() (in module tests.test_utils)

B

band_area() (in module libpyhat.derived.utils) band_asymmetry() (in module libpyhat.derived.utils) band_center() (in module libpyhat.derived.utils) band_minimum() (in module libpyhat.derived.utils) Baseline (class in libpyhat.transform.baseline_code.common) baselineMethods() (gui.core.BaselineRemoval.BaselineRemoval method) BaselineRemoval (class in gui.core.BaselineRemoval) bd1050() (in module libpyhat.derived.m3.m3_algs) bd1250() (in module libpyhat.derived.m3.m3_algs) bd1300() (in module libpyhat.derived.crism.crism_algs) bd1400() (in module libpyhat.derived.crism.crism_algs) bd1435() (in module libpyhat.derived.crism.crism_algs) bd1500_2() (in module libpyhat.derived.crism.crism_algs) bd1750_2() (in module libpyhat.derived.crism.crism_algs) bd1900() (in module libpyhat.derived.m3.m3_algs) bd1900_2() (in module libpyhat.derived.crism.crism_algs) bd1900r2() (in module libpyhat.derived.crism.crism_algs) bd1um_ratio() (in module libpyhat.derived.m3.m3_algs) bd2100_2() (in module libpyhat.derived.crism.crism_algs) bd2165() (in module libpyhat.derived.crism.crism_algs) bd2190() (in module libpyhat.derived.crism.crism_algs) bd2210_2() (in module libpyhat.derived.crism.crism_algs) bd2230() (in module libpyhat.derived.crism.crism_algs) bd2250() (in module libpyhat.derived.crism.crism_algs) bd2265() (in module libpyhat.derived.crism.crism_algs)

bd2290() (in module libpyhat.derived.crism.crism_algs) bd2300() (in module libpyhat.derived.m3.m3_algs) bd2355() (in module libpyhat.derived.crism.crism_algs) bd2500h_2() (in module libpyhat.derived.crism.crism_algs) bd2600() (in module libpyhat.derived.crism.crism_algs) bd2um_ratio() (in module libpyhat.derived.m3.m3_algs) bd3000() (in module libpyhat.derived.m3.m3_algs) bd3000_old() (in module libpyhat.derived.m3.m3_algs) bd3100() (in module libpyhat.derived.crism.crism_algs) bd3200() (in module libpyhat.derived.crism.crism_algs) bd3400_2() (in module libpyhat.derived.crism.crism_algs) bd530_2() (in module libpyhat.derived.crism.crism_algs) bd620() (in module libpyhat.derived.m3.m3_algs) bd640_2() (in module libpyhat.derived.crism.crism_algs) bd860_2() (in module libpyhat.derived.crism.crism_algs) bd920_2() (in module libpyhat.derived.crism.crism_algs) bd950() (in module libpyhat.derived.m3.m3_algs) bd_func() (in module libpyhat.derived.m3.m3_funcs) bd_func1() (in module libpyhat.derived.crism.crism_funcs) bd_func2() (in module libpyhat.derived.crism.crism_funcs) bdi1000() (in module libpyhat.derived.m3.m3_algs) bdi1000IR() (in module libpyhat.derived.crism.crism_algs) bdi1000VIS() (in module libpyhat.derived.crism.crism_algs) bdi2000() (in module libpyhat.derived.m3.m3_algs) boxcar() (in module libpyhat.transform.smooth) braceyourself() (in module gui.util.themes)

C

cal_tran (class in libpyhat.transform.cal_tran) cal_tran() (libpyhat.spectral_data.SpectralData method) cal_tran_cv() (in module libpyhat.transform.cal_tran_cv) (libpyhat.spectral_data.SpectralData method) calc_Qres_Lev() (libpyhat.regression.regression.regression method) CalibrationTransfer (class in gui.core.CalibrationTransfer) CalibrationTransferCV (class in gui.core.CalibrationTransferCV) call_cal_tran() (in module libpyhat.transform.cal_tran) call_cal_tran_cv() (in module libpyhat.transform.cal_tran_cv) caltranMethods() (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) cca (class in libpyhat.transform.cal_tran) ccam_batch() (in module libpyhat.IO.io_ccam_pds) CCAM_CSV() (in module libpyhat.IO.io_ccam_pds) CCAM_SAV() (in module libpyhat.IO.io_ccam_pds) change_choices() (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) changeComboListVars() (gui.util.Modules.Modules static method) check_data() (in module libpyhat.transform.caltran_utils) check_positive() (in module libpyhat.transform.dim_red) checkbandnumbers() (in module libpyhat.utils.utils) checkdeplaid() (in module libpyhat.utils.utils) checkMinAndMax() (gui.util.Modules.Modules method) checkmonotonic() (in module libpyhat.utils.utils) cindex2() (in module libpyhat.derived.crism.crism_algs) clear() (gui.core.MainWindow.MainWindow method) clip_multiband() (in module libpyhat.derived.utils) closeEvent() (gui.core.MainWindow.MainWindow method) closest_wvl() (libpyhat.spectral_data.SpectralData method) cluster() (in module libpyhat.clustering.cluster) (libpyhat.spectral_data.SpectralData method) Clustering (class in gui.core.Clustering) clusteringMethods() (gui.core.Clustering.Clustering method) col_within_range() (in module libpyhat.utils.utils) color_check() (gui.core.Plot.Plot method) colorchoices_change_vars() (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) columnCount() (gui.util.PandasModel.PandasModel method) combine_spectral_data() (libpyhat.spectral_data.SpectralData method) CombineDataSets (class in gui.core.CombineDataSets) compute_b_a() (in module libpyhat.derived.utils) compute_slope() (in module libpyhat.derived.utils) connect_logic() (gui.core.RemoveRows.RemoveRows method) connectWidgets() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.baselineRemovalMethods.AirPLS.Ui_Form method) (gui.core.baselineRemovalMethods.ALS.Ui_Form method) (gui.core.baselineRemovalMethods.Dietrich.Ui_Form method) (gui.core.baselineRemovalMethods.FABC.Ui_Form method) (gui.core.baselineRemovalMethods.KK.Ui_Form method) (gui.core.baselineRemovalMethods.Median.Ui_Form method) (gui.core.baselineRemovalMethods.MinInterp.Ui_Form method) (gui.core.baselineRemovalMethods.Polyfit.Ui_Form method) (gui.core.baselineRemovalMethods.Rubberband.Ui_Form method) (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.caltranMethods.caltran_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_SparseDS.Ui_Form method) (gui.core.caltranMethods.caltran_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_Ratio.Ui_Form method) (gui.core.caltranMethods.caltran_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_SparseDS.Ui_Form method) (gui.core.Clustering.Clustering method) (gui.core.clusteringMethods.cluster_KMeans.Ui_Form method) (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) (gui.core.CombineDataSets.CombineDataSets method) (gui.core.CopyDataSet.CopyDataSet method) (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_LARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_LassoLARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Local.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.crossValidateMethods.cv_SVR.Ui_Form method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_JADE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LLE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_MNF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_NNMF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_PCA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_tSNE.Ui_Form method) (gui.core.EndmemberIdentify.EndmemberIdentify method) (gui.core.LoadData.LoadData method) (gui.core.LocalRegression.LocalRegression method) (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) (gui.core.Lookup.Lookup method) (gui.core.MainWindow.MainWindow method) (gui.core.MaskData.MaskData method) (gui.core.MultiplyByVector.MultiplyByVector method) (gui.core.Normalization.Normalization method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.outlierMethods.outliers_LOF.Ui_Form method) (gui.core.OutputFolder.OutputFolder method) (gui.core.PeakAreas.PeakAreas method) (gui.core.Plot.Plot method) (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) (gui.core.PlotSpectra.PlotSpectra method) (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.LARS.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.LassoLARS.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) (gui.core.regressionMethods.SVR.Ui_Form method) (gui.core.RegressionPredict.RegressionPredict method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.RemoveRows.RemoveRows method) (gui.core.RenameColumn.RenameColumn method) (gui.core.RenameData.RenameData method) (gui.core.Resample.Resample method) (gui.core.RestoreTrainedModel.RestoreTrainedModel method) (gui.core.SaveTrainedModel.SaveTrainedModel method) (gui.core.ShiftWvl.ShiftWvl method) (gui.core.SpecDeriv.SpecDeriv method) (gui.core.SpectralParameters.SpectralParameters method) (gui.core.SplitDataset.SplitDataset method) (gui.core.Standardize.Standardize method) (gui.core.StratifiedFolds.StratifiedFolds method) (gui.core.SubmodelBlend.SubmodelBlend method) (gui.core.Unmixing.Unmixing method) (gui.core.WriteToCSV.WriteToCSV method) (gui.util.Modules.Modules method)

continuum_correction() (in module libpyhat.transform.continuum) continuum_reflectance() (in module libpyhat.derived.utils) conv2im() (in module libpyhat.Unmixing.ELMM_ADMM) conv2mat() (in module libpyhat.Unmixing.ELMM_ADMM) ConvC() (in module libpyhat.Unmixing.ELMM_ADMM) copy_spectral_data() (libpyhat.spectral_data.SpectralData method) CopyDataSet (class in gui.core.CopyDataSet) count (gui.core.LocalRegression.LocalRegression attribute) crism_bd3000() (in module libpyhat.derived.crism.crism_algs) crism_bdi2000() (in module libpyhat.derived.crism.crism_algs) crism_sumutil_bdicont() (in module libpyhat.derived.crism.crism_funcs) crossform() (in module libpyhat.utils.utils) CrossValidation (class in gui.core.CrossValidation) cube_to_df() (in module libpyhat.IO.cube_to_df) cv (class in libpyhat.regression.cv) cv_core() (in module libpyhat.regression.cv)

D

d2200() (in module libpyhat.derived.crism.crism_algs) d2300() (in module libpyhat.derived.crism.crism_algs) data (gui.util.Modules.Modules attribute) data() (gui.util.PandasModel.PandasModel method) data_changed() (gui.core.SubmodelBlend.SubmodelBlend method) data_count (gui.util.Modules.Modules attribute) datafiles (gui.util.Modules.Modules attribute) datakeys (gui.util.Modules.Modules attribute) debug_mode() (gui.core.MainWindow.MainWindow method) default() (in module gui.util.themes) defaultComboItem() (gui.util.Modules.Modules static method) del_layout() (in module gui.util.delete) del_qwidget() (in module gui.util.delete) delete() (gui.core.LocalRegression.LocalRegression method) (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) (gui.core.RegressionPredict.RegressionPredict method) (gui.util.Modules.Modules method) delete_module() (gui.core.MainWindow.MainWindow method) deleteSubmodel_pushed() (gui.core.SubmodelBlend.SubmodelBlend method) demo() (in module libpyhat.transform.lra) deriv() (in module libpyhat.transform.deriv) (libpyhat.spectral_data.SpectralData method) derive_transform() (libpyhat.transform.cal_tran.admm_ds method) (libpyhat.transform.cal_tran.cal_tran method) (libpyhat.transform.cal_tran.cca method) (libpyhat.transform.cal_tran.ds method) (libpyhat.transform.cal_tran.forward_backward_ds method) (libpyhat.transform.cal_tran.ipd_ds method) (libpyhat.transform.cal_tran.no_transform method) (libpyhat.transform.cal_tran.piecewise_ds method) (libpyhat.transform.cal_tran.ratio method)

df_parameter_to_2d() (in module libpyhat.IO.cube_to_df) df_to_cube() (in module libpyhat.IO.cube_to_df) Dietrich (class in libpyhat.transform.baseline_code.dietrich) dietrich_baseline() (in module libpyhat.transform.baseline_code.dietrich) dim_red() (in module libpyhat.transform.dim_red) (libpyhat.spectral_data.SpectralData method) DimensionalityReduction (class in gui.core.DimensionalityReduction) dimensionalityReductionMethods() (gui.core.DimensionalityReduction.DimensionalityReduction method) dimred (gui.util.Modules.Modules attribute) dimredkeys (gui.util.Modules.Modules attribute) disable_colors() (gui.core.Plot.Plot method) disconnectWidgets() (gui.util.Modules.Modules method) display() (gui.core.MainWindow.TitleWindow method) do_blend() (libpyhat.regression.sm.sm method) do_cv() (libpyhat.regression.cv.cv method) do_scale() (in module libpyhat.transform.scale) dollar_sign() (in module libpyhat.transform.lra) doub2200h() (in module libpyhat.derived.crism.crism_algs) ds (class in libpyhat.transform.cal_tran)

E

elmm_admm() (in module libpyhat.Unmixing.ELMM_ADMM) emi() (in module libpyhat.emi.emi) EmittingStream (class in gui.core.MainWindow) endmember_identify() (libpyhat.spectral_data.SpectralData method) EndmemberIdentify (class in gui.core.EndmemberIdentify)

enumerate_duplicates() (in module libpyhat.utils.utils) (libpyhat.spectral_data.SpectralData method) extract() (libpyhat.emi.emi.SMACC method) extrap_full() (in module libpyhat.regression.local_rmsep) extrap_last_min() (in module libpyhat.regression.local_rmsep)

F

FABC (class in libpyhat.transform.baseline_code.fabc) fabc_baseline() (in module libpyhat.transform.baseline_code.fabc) FCLSU() (in module libpyhat.Unmixing.ELMM_ADMM) fig_options() (gui.core.Plot.Plot method) (gui.core.PlotSpectra.PlotSpectra method) figname (gui.util.Modules.Modules attribute) figs (gui.util.Modules.Modules attribute) file_search() (in module libpyhat.utils.file_search) find_in_dict() (in module libpyhat.utils.utils) find_nested_in_dict() (in module libpyhat.utils.utils)

fit() (libpyhat.regression.regression.regression method) (libpyhat.transform.baseline_code.common.Baseline method) (libpyhat.transform.dim_reductions.jade.JADE method) (libpyhat.transform.dim_reductions.lfda.LFDA method) fit_predict() (libpyhat.regression.local_regression.LocalRegression method) fit_predict_parallel() (in module libpyhat.regression.local_regression) fit_transform() (libpyhat.transform.baseline_code.common.Baseline method) (libpyhat.transform.dim_reductions.mnf.MNF method) flush() (gui.core.MainWindow.EmittingStream method) forward_backward_ds (class in libpyhat.transform.cal_tran)

G

gaussian() (in module libpyhat.transform.smooth) GBM (class in libpyhat.Unmixing.MLM) generate_dummy() (in module libpyhat.regression.local_rmsep) get_choices() (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) (gui.core.Plot.Plot method) (gui.core.SplitDataset.SplitDataset method) get_choices_unk() (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) get_colname_choices() (gui.core.RemoveRows.RemoveRows method) get_data() (gui.core.Plot.Plot method) get_data_levels() (gui.core.Plot.Plot method) get_minmax() (gui.core.Plot.Plot method) get_path() (in module libpyhat.utils.paths) get_rmse() (libpyhat.regression.sm.sm method) get_roi() (in module libpyhat.derived.utils) get_roi_avg() (in module libpyhat.derived.utils) get_rowval_choices() (gui.core.RemoveRows.RemoveRows method) get_splash() (in module gui.core.MainWindow) get_sub_spectrum() (in module libpyhat.derived.utils) get_widget() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.baselineRemovalMethods.AirPLS.Ui_Form method) (gui.core.baselineRemovalMethods.ALS.Ui_Form method) (gui.core.baselineRemovalMethods.Dietrich.Ui_Form method) (gui.core.baselineRemovalMethods.FABC.Ui_Form method) (gui.core.baselineRemovalMethods.KK.Ui_Form method) (gui.core.baselineRemovalMethods.Median.Ui_Form method) (gui.core.baselineRemovalMethods.MinInterp.Ui_Form method) (gui.core.baselineRemovalMethods.Polyfit.Ui_Form method) (gui.core.baselineRemovalMethods.Rubberband.Ui_Form method) (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.caltranMethods.caltran_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_DS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS_PLS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_SparseDS.Ui_Form method) (gui.core.caltranMethods.caltran_DS.Ui_Form method) (gui.core.caltranMethods.caltran_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_Ratio.Ui_Form method) (gui.core.caltranMethods.caltran_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_SparseDS.Ui_Form method) (gui.core.Clustering.Clustering method) (gui.core.clusteringMethods.cluster_KMeans.Ui_Form method) (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) (gui.core.CombineDataSets.CombineDataSets method) (gui.core.CopyDataSet.CopyDataSet method) (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_LARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_LassoLARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Local.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.crossValidateMethods.cv_SVR.Ui_Form method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_JADE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LLE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_MNF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_NNMF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_PCA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_tSNE.Ui_Form method) (gui.core.EndmemberIdentify.EndmemberIdentify method) (gui.core.LoadData.LoadData method) (gui.core.LocalRegression.LocalRegression method) (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) (gui.core.Lookup.Lookup method) (gui.core.MaskData.MaskData method) (gui.core.MultiplyByVector.MultiplyByVector method) (gui.core.Normalization.Normalization method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.outlierMethods.outliers_LOF.Ui_Form method) (gui.core.OutputFolder.OutputFolder method) (gui.core.PeakAreas.PeakAreas method) (gui.core.Plot.Plot method) (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) (gui.core.PlotSpectra.PlotSpectra method) (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.LARS.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.LassoLARS.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) (gui.core.regressionMethods.SVR.Ui_Form method) (gui.core.RegressionPredict.RegressionPredict method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.RemoveRows.RemoveRows method) (gui.core.RenameColumn.RenameColumn method) (gui.core.RenameData.RenameData method) (gui.core.Resample.Resample method) (gui.core.RestoreTrainedModel.RestoreTrainedModel method) (gui.core.SaveTrainedModel.SaveTrainedModel method) (gui.core.ShiftWvl.ShiftWvl method) (gui.core.SpecDeriv.SpecDeriv method) (gui.core.SpectralParameters.SpectralParameters method) (gui.core.SplitDataset.SplitDataset method) (gui.core.Standardize.Standardize method) (gui.core.StratifiedFolds.StratifiedFolds method) (gui.core.SubmodelBlend.SubmodelBlend method) (gui.core.Unmixing.Unmixing method) (gui.core.unmixingMethods.unmix_FCLS.Ui_Form method) (gui.core.unmixingMethods.unmix_GBM.Ui_Form method) (gui.core.unmixingMethods.unmix_LMM.Ui_Form method) (gui.core.unmixingMethods.unmix_NNLS.Ui_Form method) (gui.core.unmixingMethods.unmix_UCLS.Ui_Form method) (gui.core.WriteToCSV.WriteToCSV method) (gui.util.Modules.Modules method) get_working_data() (libpyhat.transform.cal_tran.ds method) get_wvls() (libpyhat.spectral_data.SpectralData method) getAffinity() (in module libpyhat.transform.dim_reductions.lfda) getChangedValues() (gui.util.Modules.Modules static method) getDataButton_clicked() (gui.core.LoadData.LoadData method) (gui.core.MaskData.MaskData method) getGuiParams() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.Clustering.Clustering method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.Unmixing.Unmixing method) (gui.util.Modules.Modules method) gethist_cdf() (in module libpyhat.transform.stretch) getMainWindowParent() (gui.util.Modules.Modules method) getMethodParams() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.Clustering.Clustering method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.Unmixing.Unmixing method) getnearest() (in module libpyhat.utils.utils) getValues() (gui.core.Normalization.norm_range method) GetValues() (gui.core.RemoveRows.remove_operation method) getValues() (gui.core.SubmodelBlend.subWidgets method) getWidgetItems() (gui.core.MainWindow.MainWindow method) gui module gui.core module gui.core.About module gui.core.AboutQt module gui.core.BaselineRemoval module gui.core.baselineRemovalMethods module gui.core.baselineRemovalMethods.AirPLS module gui.core.baselineRemovalMethods.ALS module gui.core.baselineRemovalMethods.Dietrich module gui.core.baselineRemovalMethods.FABC module gui.core.baselineRemovalMethods.KK module gui.core.baselineRemovalMethods.Median module gui.core.baselineRemovalMethods.MinInterp module gui.core.baselineRemovalMethods.Polyfit module gui.core.baselineRemovalMethods.Rubberband module gui.core.baselineRemovalMethods.WaveletSpline module gui.core.CalibrationTransfer module gui.core.CalibrationTransferCV module gui.core.caltranMethods module gui.core.caltranMethods.caltran_CCA module gui.core.caltranMethods.caltran_cv_CCA module gui.core.caltranMethods.caltran_cv_DS module gui.core.caltranMethods.caltran_cv_FBDS module gui.core.caltranMethods.caltran_cv_IPDDS module gui.core.caltranMethods.caltran_cv_LASSODS module gui.core.caltranMethods.caltran_cv_NewCCA module gui.core.caltranMethods.caltran_cv_PDS module gui.core.caltranMethods.caltran_cv_PDS_PLS module gui.core.caltranMethods.caltran_cv_RidgeDS module gui.core.caltranMethods.caltran_cv_SparseDS module gui.core.caltranMethods.caltran_DS module gui.core.caltranMethods.caltran_FBDS module gui.core.caltranMethods.caltran_IPDDS module gui.core.caltranMethods.caltran_LASSODS module gui.core.caltranMethods.caltran_NewCCA module gui.core.caltranMethods.caltran_PDS module gui.core.caltranMethods.caltran_prepare_data module gui.core.caltranMethods.caltran_Ratio module gui.core.caltranMethods.caltran_RidgeDS module gui.core.caltranMethods.caltran_SparseDS module gui.core.Clustering module gui.core.clusteringMethods module gui.core.clusteringMethods.cluster_KMeans module gui.core.clusteringMethods.cluster_Spectral module gui.core.CombineDataSets module gui.core.CopyDataSet module gui.core.crossValidateMethods module gui.core.crossValidateMethods.cv_ARD module gui.core.crossValidateMethods.cv_BayesianRidge module gui.core.crossValidateMethods.cv_ElasticNet module gui.core.crossValidateMethods.cv_GBR module gui.core.crossValidateMethods.cv_GP module gui.core.crossValidateMethods.cv_KRR module gui.core.crossValidateMethods.cv_LARS module gui.core.crossValidateMethods.cv_Lasso module gui.core.crossValidateMethods.cv_LassoLARS module gui.core.crossValidateMethods.cv_Local module gui.core.crossValidateMethods.cv_OLS module gui.core.crossValidateMethods.cv_OMP module gui.core.crossValidateMethods.cv_PLS module gui.core.crossValidateMethods.cv_RF module gui.core.crossValidateMethods.cv_Ridge module gui.core.crossValidateMethods.cv_SVR module gui.core.CrossValidation module gui.core.DimensionalityReduction module gui.core.dimensionalityReductionMethods module gui.core.dimensionalityReductionMethods.dimred_FastICA module gui.core.dimensionalityReductionMethods.dimred_JADE module gui.core.dimensionalityReductionMethods.dimred_LDA module gui.core.dimensionalityReductionMethods.dimred_LFDA module gui.core.dimensionalityReductionMethods.dimred_LLE module gui.core.dimensionalityReductionMethods.dimred_MNF module gui.core.dimensionalityReductionMethods.dimred_NNMF module gui.core.dimensionalityReductionMethods.dimred_PCA module gui.core.dimensionalityReductionMethods.dimred_tSNE module gui.core.EndmemberIdentify module gui.core.LoadData module gui.core.LocalRegression module gui.core.LocalRMSEPCalc module gui.core.LocalRMSEPExplore module gui.core.Lookup module gui.core.MainWindow module gui.core.MaskData module gui.core.MultiplyByVector module gui.core.Normalization module gui.core.OutlierIdentify module gui.core.outlierMethods module gui.core.outlierMethods.outliers_IsolationForest module gui.core.outlierMethods.outliers_LOF module gui.core.OutputFolder module gui.core.PeakAreas module gui.core.Plot module gui.core.Plot_ICA_PCA module gui.core.PlotSpectra module gui.core.ReadChemCamData module gui.core.ReadSuperCamData module gui.core.regressionMethods module gui.core.regressionMethods.ARD module gui.core.regressionMethods.BayesianRidge module gui.core.regressionMethods.ElasticNet module gui.core.regressionMethods.GBR module gui.core.regressionMethods.GP module gui.core.regressionMethods.KRR module

gui.core.regressionMethods.LARS module gui.core.regressionMethods.Lasso module gui.core.regressionMethods.LassoLARS module gui.core.regressionMethods.OLS module gui.core.regressionMethods.OMP module gui.core.regressionMethods.PLS module gui.core.regressionMethods.RF module gui.core.regressionMethods.Ridge module gui.core.regressionMethods.SVR module gui.core.RegressionPredict module gui.core.RegressionTrain module gui.core.RemoveRows module gui.core.RenameColumn module gui.core.RenameData module gui.core.Resample module gui.core.RestoreTrainedModel module gui.core.SaveTrainedModel module gui.core.setShortcuts module gui.core.ShiftWvl module gui.core.SpecDeriv module gui.core.SpectralParameters module gui.core.SplitDataset module gui.core.Standardize module gui.core.StratifiedFolds module gui.core.SubmodelBlend module gui.core.Unmixing module gui.core.unmixingMethods module gui.core.unmixingMethods.unmix_FCLS module gui.core.unmixingMethods.unmix_GBM module gui.core.unmixingMethods.unmix_LMM module gui.core.unmixingMethods.unmix_NNLS module gui.core.unmixingMethods.unmix_UCLS module gui.core.WriteToCSV module gui.ui module gui.ui.About module gui.ui.AboutQt module gui.ui.AirPLS module gui.ui.ALS module gui.ui.ARD module gui.ui.BaselineRemoval module gui.ui.BayesianRidge module gui.ui.CalibrationTransfer module gui.ui.CalibrationTransferCV module gui.ui.caltran_CCA module gui.ui.caltran_cv_CCA module gui.ui.caltran_cv_CCANew module gui.ui.caltran_cv_DS module gui.ui.caltran_cv_ForwardBackward_DS module gui.ui.caltran_cv_IPD_DS module gui.ui.caltran_cv_LASSODS module gui.ui.caltran_cv_PDS module gui.ui.caltran_cv_PDS_PLS module gui.ui.caltran_cv_Ratio module gui.ui.caltran_cv_RidgeDS module gui.ui.caltran_cv_SparseDS module gui.ui.caltran_DS module gui.ui.caltran_ForwardBackward_DS module gui.ui.caltran_IPD_DS module gui.ui.caltran_LASSODS module gui.ui.caltran_PDS module gui.ui.caltran_PDS_PLS module gui.ui.caltran_Ratio module gui.ui.caltran_RidgeDS module gui.ui.caltran_SparseDS module gui.ui.ClassificationTrain module gui.ui.classify_LDA module gui.ui.cluster_KMeans module gui.ui.cluster_Spectral module gui.ui.Clustering module gui.ui.CombineDataSets module gui.ui.CopyDataSets module gui.ui.CrossValidation module gui.ui.cv_ARD module gui.ui.cv_BayesianRidge module gui.ui.cv_ElasticNet module gui.ui.cv_GBR module gui.ui.cv_GP module gui.ui.cv_KRR module gui.ui.cv_LARS module gui.ui.cv_Lasso module gui.ui.cv_LassoLARS module gui.ui.cv_Local module gui.ui.cv_OLS module gui.ui.cv_OMP module gui.ui.cv_PLS module gui.ui.cv_RF module gui.ui.cv_Ridge module gui.ui.cv_SVR module gui.ui.DataTable module gui.ui.Dietrich module gui.ui.DimensionalityReduction module gui.ui.dimred_FastICA module gui.ui.dimred_JADE module gui.ui.dimred_LDA module gui.ui.dimred_LFDA module gui.ui.dimred_LLE module gui.ui.dimred_MNF module gui.ui.dimred_NMF module gui.ui.dimred_NNMF module gui.ui.dimred_PCA module gui.ui.dimred_tSNE module gui.ui.ElasticNet module gui.ui.EndmemberID module gui.ui.FABC module gui.ui.GBR module gui.ui.GP module gui.ui.Interpolation module gui.ui.KK module gui.ui.KRR module gui.ui.LARS module gui.ui.Lasso module gui.ui.LassoLARS module gui.ui.LoadData module gui.ui.LocalRegression module gui.ui.LocalRMSEP module gui.ui.LocalRMSEPCalc module gui.ui.LocalRMSEPExplore module gui.ui.Lookup module gui.ui.MainWindow module gui.ui.Mario module gui.ui.MaskData module gui.ui.Median module gui.ui.MinInterp module gui.ui.MinSpline module gui.ui.MultiplyByVector module gui.ui.Normalization module gui.ui.OLS module gui.ui.OMP module gui.ui.OutlierIdentify module gui.ui.OutlierRemoval module gui.ui.outliers_IsolationForest module gui.ui.outliers_LOF module gui.ui.OutputFolder module gui.ui.PeakAreas module gui.ui.Plot module gui.ui.Plot_ICA_PCA module gui.ui.PlotSpectra module gui.ui.PLS module gui.ui.Polyfit module gui.ui.RandomForest module gui.ui.ReadChemCamData module gui.ui.ReadSuperCamData module gui.ui.RegressionCV module gui.ui.RegressionPredict module gui.ui.RegressionTrain module gui.ui.RemoveRows module gui.ui.RemoveRows_new module gui.ui.RenameColumn module gui.ui.RenameData module gui.ui.Resample module gui.ui.RestoreRegressionModel module gui.ui.RestoreTrainedModel module gui.ui.Ridge module gui.ui.Rubberband module gui.ui.SaveRegressionModel module gui.ui.SaveTrainedModel module gui.ui.setShortcuts module gui.ui.ShiftWvl module gui.ui.SpecDeriv module gui.ui.SpectralParameters module gui.ui.SplitDataset module gui.ui.Standardize module gui.ui.StratifiedFolds module gui.ui.SubmodelBlend module gui.ui.SubmodelPredict module gui.ui.SVR module gui.ui.unmix_FCLS module gui.ui.unmix_GBM module gui.ui.unmix_LMM module gui.ui.unmix_NNLS module gui.ui.unmix_UCLS module gui.ui.Unmixing module gui.ui.WaveletSpline module gui.ui.WriteToCSV module gui.util module gui.util.colormaps module gui.util.delete module gui.util.excepthook module gui.util.Modules module gui.util.PandasModel module gui.util.plots module gui.util.Qtickle module gui.util.themes module gui.util.Worker module guiChanged() (gui.util.Modules.Modules method) (gui.util.Qtickle.Qtickle method) guiDisonnect() (gui.util.Qtickle.Qtickle method) guiRestore() (gui.util.Qtickle.Qtickle method) guiSave() (gui.util.Qtickle.Qtickle method)

H

h2o2_func() (in module libpyhat.derived.m3.development_funcs) h2o3_func() (in module libpyhat.derived.m3.development_funcs) h2o4_func() (in module libpyhat.derived.m3.development_funcs) h2o5_func() (in module libpyhat.derived.m3.development_funcs) hcp_index2() (in module libpyhat.derived.crism.crism_algs) headerData() (gui.util.PandasModel.PandasModel method) Hidden() (gui.core.Normalization.norm_range method) (gui.core.RemoveRows.remove_operation method) hide_field() (gui.core.LoadData.LoadData method) hide_for_kernel() (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) hide_operations() (gui.core.RemoveRows.RemoveRows method) hide_options() (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method)

hideAll() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.Clustering.Clustering method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.Unmixing.Unmixing method) hidefit() (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) histequ_stretch() (in module libpyhat.transform.stretch)

I

ice_func() (in module libpyhat.derived.m3.development_funcs) icer1_2() (in module libpyhat.derived.crism.crism_algs) identify_rows() (in module libpyhat.utils.utils) interp() (in module libpyhat.transform.interp) (libpyhat.spectral_data.SpectralData method) inverse_stretch() (in module libpyhat.transform.stretch)

ipd_ds (class in libpyhat.transform.cal_tran) irr1() (in module libpyhat.derived.crism.crism_algs) irr2() (in module libpyhat.derived.crism.crism_algs) irr3() (in module libpyhat.derived.crism.crism_algs) isEnabled() (gui.util.Modules.Modules method) islope1() (in module libpyhat.derived.crism.crism_algs) iterative_threshold() (in module libpyhat.transform.baseline_code.common)

J

JADE (class in libpyhat.transform.dim_reductions.jade)

jadeR() (in module libpyhat.transform.dim_reductions.jade)

K

kajfosz_kwiatek_baseline() (in module libpyhat.transform.baseline_code.kajfosz_kwiatek)

KajfoszKwiatek (class in libpyhat.transform.baseline_code.kajfosz_kwiatek)

L

L2_norm() (libpyhat.transform.cal_tran.admm_ds method) lcp_index2() (in module libpyhat.derived.crism.crism_algs) LFDA (class in libpyhat.transform.dim_reductions.lfda) libpyhat module, [1] libpyhat.clustering module libpyhat.clustering.cluster module libpyhat.derived module libpyhat.derived.crism module libpyhat.derived.crism.crism_algs module libpyhat.derived.crism.crism_funcs module libpyhat.derived.m3 module libpyhat.derived.m3.development_funcs module libpyhat.derived.m3.m3_algs module libpyhat.derived.m3.m3_funcs module libpyhat.derived.utils module libpyhat.emi module libpyhat.emi.emi module libpyhat.examples module libpyhat.examples.example_Kaguya_Spectral_Profiler module libpyhat.IO module libpyhat.IO.cube_to_df module libpyhat.IO.io_ccam_pds module libpyhat.IO.io_cube module libpyhat.IO.io_kaguya_sp module libpyhat.IO.io_supercam_pds module libpyhat.regression module libpyhat.regression.cv module libpyhat.regression.local_regression module libpyhat.regression.local_rmsep module libpyhat.regression.regression module libpyhat.regression.sm module libpyhat.spectral_data module libpyhat.transform module libpyhat.transform.baseline_code module libpyhat.transform.baseline_code.airpls module libpyhat.transform.baseline_code.als module libpyhat.transform.baseline_code.common module libpyhat.transform.baseline_code.dietrich module libpyhat.transform.baseline_code.fabc module libpyhat.transform.baseline_code.kajfosz_kwiatek module libpyhat.transform.baseline_code.median module libpyhat.transform.baseline_code.min_spline module libpyhat.transform.baseline_code.polyfit module libpyhat.transform.baseline_code.rubberband module libpyhat.transform.baseline_code.wavelet_a_trous module

libpyhat.transform.baseline_code.wavelet_spline module libpyhat.transform.cal_tran module libpyhat.transform.cal_tran_cv module libpyhat.transform.caltran_utils module libpyhat.transform.continuum module libpyhat.transform.deriv module libpyhat.transform.dim_red module libpyhat.transform.dim_reductions module libpyhat.transform.dim_reductions.jade module libpyhat.transform.dim_reductions.lfda module libpyhat.transform.dim_reductions.mnf module libpyhat.transform.interp module libpyhat.transform.lra module libpyhat.transform.mask module libpyhat.transform.meancenter module libpyhat.transform.multiply_vector module libpyhat.transform.norm module libpyhat.transform.peak_area module libpyhat.transform.remove_baseline module libpyhat.transform.scale module libpyhat.transform.shift_spect module libpyhat.transform.smooth module libpyhat.transform.stretch module libpyhat.Unmixing module libpyhat.Unmixing.elmm module libpyhat.Unmixing.ELMM_ADMM module libpyhat.Unmixing.MLM module libpyhat.Unmixing.unmix module libpyhat.utils module libpyhat.utils.file_search module libpyhat.utils.folds module libpyhat.utils.lookup module libpyhat.utils.outlier_identify module libpyhat.utils.paths module libpyhat.utils.utils module line_fit() (in module libpyhat.derived.utils) linear() (in module libpyhat.transform.continuum) linear_function() (in module libpyhat.regression.local_rmsep) linear_stretch() (in module libpyhat.transform.stretch) list_amend() (gui.util.Modules.Modules static method) LMM (class in libpyhat.Unmixing.MLM) LoadData (class in gui.core.LoadData) local_rmse_calc() (in module libpyhat.regression.local_rmsep) local_rmse_explore() (in module libpyhat.regression.local_rmsep) LocalRegression (class in gui.core.LocalRegression) (class in libpyhat.regression.local_regression) LocalRMSEPCalc (class in gui.core.LocalRMSEPCalc) LocalRMSEPExplore (class in gui.core.LocalRMSEPExplore) Lookup (class in gui.core.Lookup) lookup() (in module libpyhat.utils.lookup) (libpyhat.spectral_data.SpectralData method) low_rank_align() (in module libpyhat.transform.lra) low_rank_repr() (in module libpyhat.transform.lra)

M

main() (in module gui.core.MainWindow) MainWindow (class in gui.core.MainWindow) make_3d() (in module libpyhat.transform.dim_reductions.mnf) make_caltran_widget() (gui.core.CalibrationTransfer.CalibrationTransfer method) make_cluster_widget() (gui.core.Clustering.Clustering method) make_dimred_widget() (gui.core.DimensionalityReduction.DimensionalityReduction method) make_homogeneous() (in module libpyhat.utils.utils) make_outlier_widget() (gui.core.OutlierIdentify.OutlierIdentify method) make_plot() (in module gui.util.plots) make_regression_widget() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.CrossValidation.CrossValidation method) (gui.core.LocalRegression.LocalRegression method) (gui.core.RegressionTrain.RegressionTrain method) make_unmix_widget() (gui.core.Unmixing.Unmixing method) mask() (in module libpyhat.transform.mask) (libpyhat.spectral_data.SpectralData method) MaskData (class in gui.core.MaskData) meancenter() (in module libpyhat.transform.meancenter) median_baseline() (in module libpyhat.transform.baseline_code.median) median_kernel() (in module libpyhat.derived.utils) MedianFilter (class in libpyhat.transform.baseline_code.median) menu_item_shortcuts() (gui.core.MainWindow.MainWindow method) min2200() (in module libpyhat.derived.crism.crism_algs) min2250() (in module libpyhat.derived.crism.crism_algs) min2295_2480() (in module libpyhat.derived.crism.crism_algs) min2345_2537() (in module libpyhat.derived.crism.crism_algs) min_2_bands() (in module libpyhat.derived.crism.crism_funcs) min_interp() (in module libpyhat.transform.baseline_code.min_spline) minimum_interp (class in libpyhat.transform.baseline_code.min_spline) mismatch_rmse() (in module gui.core.CalibrationTransferCV) MNF (class in libpyhat.transform.dim_reductions.mnf) mnf() (in module libpyhat.transform.dim_reductions.mnf) model_count (gui.util.Modules.Modules attribute) model_GBM() (in module libpyhat.Unmixing.MLM) model_LMM() (in module libpyhat.Unmixing.MLM) model_xvars (gui.util.Modules.Modules attribute) model_yvars (gui.util.Modules.Modules attribute) modelkeys (gui.util.Modules.Modules attribute) models (gui.util.Modules.Modules attribute) module gui gui.core gui.core.About gui.core.AboutQt gui.core.BaselineRemoval gui.core.baselineRemovalMethods gui.core.baselineRemovalMethods.AirPLS gui.core.baselineRemovalMethods.ALS gui.core.baselineRemovalMethods.Dietrich gui.core.baselineRemovalMethods.FABC gui.core.baselineRemovalMethods.KK gui.core.baselineRemovalMethods.Median gui.core.baselineRemovalMethods.MinInterp gui.core.baselineRemovalMethods.Polyfit gui.core.baselineRemovalMethods.Rubberband gui.core.baselineRemovalMethods.WaveletSpline gui.core.CalibrationTransfer gui.core.CalibrationTransferCV gui.core.caltranMethods gui.core.caltranMethods.caltran_CCA gui.core.caltranMethods.caltran_cv_CCA gui.core.caltranMethods.caltran_cv_DS gui.core.caltranMethods.caltran_cv_FBDS gui.core.caltranMethods.caltran_cv_IPDDS gui.core.caltranMethods.caltran_cv_LASSODS gui.core.caltranMethods.caltran_cv_NewCCA gui.core.caltranMethods.caltran_cv_PDS gui.core.caltranMethods.caltran_cv_PDS_PLS gui.core.caltranMethods.caltran_cv_RidgeDS gui.core.caltranMethods.caltran_cv_SparseDS gui.core.caltranMethods.caltran_DS gui.core.caltranMethods.caltran_FBDS gui.core.caltranMethods.caltran_IPDDS gui.core.caltranMethods.caltran_LASSODS gui.core.caltranMethods.caltran_NewCCA gui.core.caltranMethods.caltran_PDS gui.core.caltranMethods.caltran_prepare_data gui.core.caltranMethods.caltran_Ratio gui.core.caltranMethods.caltran_RidgeDS gui.core.caltranMethods.caltran_SparseDS gui.core.Clustering gui.core.clusteringMethods gui.core.clusteringMethods.cluster_KMeans gui.core.clusteringMethods.cluster_Spectral gui.core.CombineDataSets gui.core.CopyDataSet gui.core.crossValidateMethods gui.core.crossValidateMethods.cv_ARD gui.core.crossValidateMethods.cv_BayesianRidge gui.core.crossValidateMethods.cv_ElasticNet gui.core.crossValidateMethods.cv_GBR gui.core.crossValidateMethods.cv_GP gui.core.crossValidateMethods.cv_KRR gui.core.crossValidateMethods.cv_LARS gui.core.crossValidateMethods.cv_Lasso gui.core.crossValidateMethods.cv_LassoLARS gui.core.crossValidateMethods.cv_Local gui.core.crossValidateMethods.cv_OLS gui.core.crossValidateMethods.cv_OMP gui.core.crossValidateMethods.cv_PLS gui.core.crossValidateMethods.cv_RF gui.core.crossValidateMethods.cv_Ridge gui.core.crossValidateMethods.cv_SVR gui.core.CrossValidation gui.core.DimensionalityReduction gui.core.dimensionalityReductionMethods gui.core.dimensionalityReductionMethods.dimred_FastICA gui.core.dimensionalityReductionMethods.dimred_JADE gui.core.dimensionalityReductionMethods.dimred_LDA gui.core.dimensionalityReductionMethods.dimred_LFDA gui.core.dimensionalityReductionMethods.dimred_LLE gui.core.dimensionalityReductionMethods.dimred_MNF gui.core.dimensionalityReductionMethods.dimred_NNMF gui.core.dimensionalityReductionMethods.dimred_PCA gui.core.dimensionalityReductionMethods.dimred_tSNE gui.core.EndmemberIdentify gui.core.LoadData gui.core.LocalRegression gui.core.LocalRMSEPCalc gui.core.LocalRMSEPExplore gui.core.Lookup gui.core.MainWindow gui.core.MaskData gui.core.MultiplyByVector gui.core.Normalization gui.core.OutlierIdentify gui.core.outlierMethods gui.core.outlierMethods.outliers_IsolationForest gui.core.outlierMethods.outliers_LOF gui.core.OutputFolder gui.core.PeakAreas gui.core.Plot gui.core.Plot_ICA_PCA gui.core.PlotSpectra gui.core.ReadChemCamData gui.core.ReadSuperCamData gui.core.regressionMethods gui.core.regressionMethods.ARD gui.core.regressionMethods.BayesianRidge gui.core.regressionMethods.ElasticNet gui.core.regressionMethods.GBR gui.core.regressionMethods.GP gui.core.regressionMethods.KRR gui.core.regressionMethods.LARS gui.core.regressionMethods.Lasso gui.core.regressionMethods.LassoLARS gui.core.regressionMethods.OLS gui.core.regressionMethods.OMP gui.core.regressionMethods.PLS gui.core.regressionMethods.RF gui.core.regressionMethods.Ridge gui.core.regressionMethods.SVR gui.core.RegressionPredict gui.core.RegressionTrain gui.core.RemoveRows gui.core.RenameColumn gui.core.RenameData gui.core.Resample gui.core.RestoreTrainedModel gui.core.SaveTrainedModel gui.core.setShortcuts gui.core.ShiftWvl gui.core.SpecDeriv gui.core.SpectralParameters gui.core.SplitDataset gui.core.Standardize gui.core.StratifiedFolds gui.core.SubmodelBlend gui.core.Unmixing gui.core.unmixingMethods gui.core.unmixingMethods.unmix_FCLS gui.core.unmixingMethods.unmix_GBM gui.core.unmixingMethods.unmix_LMM gui.core.unmixingMethods.unmix_NNLS gui.core.unmixingMethods.unmix_UCLS gui.core.WriteToCSV gui.ui gui.ui.About gui.ui.AboutQt gui.ui.AirPLS gui.ui.ALS gui.ui.ARD gui.ui.BaselineRemoval gui.ui.BayesianRidge gui.ui.CalibrationTransfer gui.ui.CalibrationTransferCV gui.ui.caltran_CCA gui.ui.caltran_cv_CCA gui.ui.caltran_cv_CCANew gui.ui.caltran_cv_DS gui.ui.caltran_cv_ForwardBackward_DS gui.ui.caltran_cv_IPD_DS gui.ui.caltran_cv_LASSODS gui.ui.caltran_cv_PDS gui.ui.caltran_cv_PDS_PLS gui.ui.caltran_cv_Ratio gui.ui.caltran_cv_RidgeDS gui.ui.caltran_cv_SparseDS gui.ui.caltran_DS gui.ui.caltran_ForwardBackward_DS gui.ui.caltran_IPD_DS gui.ui.caltran_LASSODS gui.ui.caltran_PDS gui.ui.caltran_PDS_PLS gui.ui.caltran_Ratio gui.ui.caltran_RidgeDS gui.ui.caltran_SparseDS gui.ui.ClassificationTrain gui.ui.classify_LDA gui.ui.cluster_KMeans gui.ui.cluster_Spectral gui.ui.Clustering gui.ui.CombineDataSets gui.ui.CopyDataSets gui.ui.CrossValidation gui.ui.cv_ARD gui.ui.cv_BayesianRidge gui.ui.cv_ElasticNet gui.ui.cv_GBR gui.ui.cv_GP gui.ui.cv_KRR gui.ui.cv_LARS gui.ui.cv_Lasso gui.ui.cv_LassoLARS gui.ui.cv_Local gui.ui.cv_OLS gui.ui.cv_OMP gui.ui.cv_PLS gui.ui.cv_RF gui.ui.cv_Ridge gui.ui.cv_SVR gui.ui.DataTable gui.ui.Dietrich gui.ui.DimensionalityReduction gui.ui.dimred_FastICA gui.ui.dimred_JADE gui.ui.dimred_LDA gui.ui.dimred_LFDA gui.ui.dimred_LLE gui.ui.dimred_MNF gui.ui.dimred_NMF gui.ui.dimred_NNMF gui.ui.dimred_PCA gui.ui.dimred_tSNE gui.ui.ElasticNet gui.ui.EndmemberID gui.ui.FABC gui.ui.GBR gui.ui.GP gui.ui.Interpolation gui.ui.KK gui.ui.KRR gui.ui.LARS gui.ui.Lasso gui.ui.LassoLARS gui.ui.LoadData gui.ui.LocalRegression gui.ui.LocalRMSEP gui.ui.LocalRMSEPCalc gui.ui.LocalRMSEPExplore gui.ui.Lookup gui.ui.MainWindow gui.ui.Mario gui.ui.MaskData gui.ui.Median gui.ui.MinInterp gui.ui.MinSpline gui.ui.MultiplyByVector gui.ui.Normalization gui.ui.OLS gui.ui.OMP gui.ui.OutlierIdentify gui.ui.OutlierRemoval gui.ui.outliers_IsolationForest gui.ui.outliers_LOF gui.ui.OutputFolder gui.ui.PeakAreas gui.ui.Plot gui.ui.Plot_ICA_PCA gui.ui.PlotSpectra gui.ui.PLS gui.ui.Polyfit gui.ui.RandomForest gui.ui.ReadChemCamData gui.ui.ReadSuperCamData gui.ui.RegressionCV gui.ui.RegressionPredict gui.ui.RegressionTrain gui.ui.RemoveRows gui.ui.RemoveRows_new gui.ui.RenameColumn gui.ui.RenameData gui.ui.Resample gui.ui.RestoreRegressionModel gui.ui.RestoreTrainedModel gui.ui.Ridge gui.ui.Rubberband gui.ui.SaveRegressionModel gui.ui.SaveTrainedModel gui.ui.setShortcuts gui.ui.ShiftWvl gui.ui.SpecDeriv gui.ui.SpectralParameters gui.ui.SplitDataset gui.ui.Standardize gui.ui.StratifiedFolds gui.ui.SubmodelBlend gui.ui.SubmodelPredict gui.ui.SVR gui.ui.unmix_FCLS gui.ui.unmix_GBM gui.ui.unmix_LMM gui.ui.unmix_NNLS gui.ui.unmix_UCLS gui.ui.Unmixing gui.ui.WaveletSpline gui.ui.WriteToCSV gui.util gui.util.colormaps gui.util.delete gui.util.excepthook gui.util.Modules gui.util.PandasModel gui.util.plots gui.util.Qtickle gui.util.themes gui.util.Worker libpyhat, [1] libpyhat.clustering libpyhat.clustering.cluster libpyhat.derived libpyhat.derived.crism libpyhat.derived.crism.crism_algs libpyhat.derived.crism.crism_funcs libpyhat.derived.m3 libpyhat.derived.m3.development_funcs libpyhat.derived.m3.m3_algs libpyhat.derived.m3.m3_funcs libpyhat.derived.utils libpyhat.emi libpyhat.emi.emi libpyhat.examples libpyhat.examples.example_Kaguya_Spectral_Profiler libpyhat.IO libpyhat.IO.cube_to_df libpyhat.IO.io_ccam_pds libpyhat.IO.io_cube libpyhat.IO.io_kaguya_sp libpyhat.IO.io_supercam_pds libpyhat.regression libpyhat.regression.cv libpyhat.regression.local_regression libpyhat.regression.local_rmsep libpyhat.regression.regression libpyhat.regression.sm libpyhat.spectral_data libpyhat.transform libpyhat.transform.baseline_code libpyhat.transform.baseline_code.airpls libpyhat.transform.baseline_code.als libpyhat.transform.baseline_code.common libpyhat.transform.baseline_code.dietrich libpyhat.transform.baseline_code.fabc libpyhat.transform.baseline_code.kajfosz_kwiatek libpyhat.transform.baseline_code.median libpyhat.transform.baseline_code.min_spline libpyhat.transform.baseline_code.polyfit libpyhat.transform.baseline_code.rubberband libpyhat.transform.baseline_code.wavelet_a_trous libpyhat.transform.baseline_code.wavelet_spline libpyhat.transform.cal_tran libpyhat.transform.cal_tran_cv libpyhat.transform.caltran_utils libpyhat.transform.continuum libpyhat.transform.deriv libpyhat.transform.dim_red libpyhat.transform.dim_reductions libpyhat.transform.dim_reductions.jade libpyhat.transform.dim_reductions.lfda libpyhat.transform.dim_reductions.mnf libpyhat.transform.interp libpyhat.transform.lra libpyhat.transform.mask libpyhat.transform.meancenter libpyhat.transform.multiply_vector libpyhat.transform.norm libpyhat.transform.peak_area libpyhat.transform.remove_baseline libpyhat.transform.scale libpyhat.transform.shift_spect libpyhat.transform.smooth libpyhat.transform.stretch libpyhat.Unmixing libpyhat.Unmixing.elmm libpyhat.Unmixing.ELMM_ADMM libpyhat.Unmixing.MLM libpyhat.Unmixing.unmix libpyhat.utils libpyhat.utils.file_search libpyhat.utils.folds libpyhat.utils.lookup libpyhat.utils.outlier_identify libpyhat.utils.paths libpyhat.utils.utils run_pyhat_gui tests tests.data tests.derived tests.derived.crism tests.derived.crism.crism_wv tests.derived.crism.test_crism tests.derived.m3 tests.derived.m3.m3_wv tests.derived.m3.test_m3_io tests.derived.m3.test_new tests.derived.m3.test_pipe tests.test_utils

Modules (class in gui.util.Modules) mousePressEvent() (gui.util.Modules.Modules method) multi_dot() (in module libpyhat.transform.caltran_utils) multiply_vector() (in module libpyhat.transform.multiply_vector) (libpyhat.spectral_data.SpectralData method) MultiplyByVector (class in gui.core.MultiplyByVector) mustard() (in module libpyhat.derived.m3.m3_funcs) my_exception_hook() (in module gui.util.excepthook)

N

new() (gui.core.MainWindow.MainWindow method) newfig_check() (gui.core.Plot.Plot method) (gui.core.PlotSpectra.PlotSpectra method) no_transform (class in libpyhat.transform.cal_tran) norm() (in module libpyhat.transform.norm) (libpyhat.spectral_data.SpectralData method)

norm_range (class in gui.core.Normalization) norm_total() (in module libpyhat.transform.norm) normal_mode() (gui.core.MainWindow.MainWindow method) Normalization (class in gui.core.Normalization) normalize_vector() (in module libpyhat.utils.utils) normalOutputWritten() (gui.core.MainWindow.MainWindow method)

O

olindex() (in module libpyhat.derived.m3.m3_algs) olivine_index3() (in module libpyhat.derived.crism.crism_algs) on_addRange_pushed() (gui.core.Normalization.Normalization method) on_deleteModuleComboBox_changed() (gui.core.MainWindow.MainWindow method) on_deleteRange_pushed() (gui.core.Normalization.Normalization method) on_getDataButton_clicked() (gui.core.MultiplyByVector.MultiplyByVector method) (gui.core.PeakAreas.PeakAreas method) on_insertModuleComboBox_changed() (gui.core.MainWindow.MainWindow method) on_okButton_clicked() (gui.core.MainWindow.MainWindow method) on_outPutLocationButton_clicked() (gui.core.MainWindow.MainWindow method) (gui.core.OutputFolder.OutputFolder method) on_plotFilenamePushButton_clicked() (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) on_pushButton_clicked() (gui.core.PlotSpectra.PlotSpectra method) (gui.core.WriteToCSV.WriteToCSV method) on_Rerun_Button_clicked() (gui.core.MainWindow.MainWindow method) on_restore_clicked() (gui.core.MainWindow.MainWindow method) on_restorePushButton_clicked() (gui.core.RestoreTrainedModel.RestoreTrainedModel method) on_save_clicked() (gui.core.MainWindow.MainWindow method)

on_savePushButton_clicked() (gui.core.SaveTrainedModel.SaveTrainedModel method) on_searchpathButton_clicked() (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) on_stopButton_clicked() (gui.core.MainWindow.MainWindow method) oneum_continuum() (in module libpyhat.derived.m3.m3_funcs) oneum_fwhm() (in module libpyhat.derived.m3.m3_algs) oneum_min() (in module libpyhat.derived.m3.m3_algs) oneum_slope() (in module libpyhat.derived.m3.m3_algs) oneum_sym() (in module libpyhat.derived.m3.m3_algs) onFinished() (gui.core.MainWindow.MainWindow method) onStart() (gui.core.MainWindow.MainWindow method) opt_func() (in module libpyhat.Unmixing.MLM) outlier_identify() (in module libpyhat.utils.outlier_identify) (libpyhat.spectral_data.SpectralData method) OutlierIdentify (class in gui.core.OutlierIdentify) outlierIdentifyMethods() (gui.core.OutlierIdentify.OutlierIdentify method) outpath (gui.util.Modules.Modules attribute) OutputFolder (class in gui.core.OutputFolder)

P

PandasModel (class in gui.util.PandasModel) param_ranges() (libpyhat.transform.baseline_code.airpls.AirPLS method) (libpyhat.transform.baseline_code.als.ALS method) (libpyhat.transform.baseline_code.common.Baseline method) (libpyhat.transform.baseline_code.dietrich.Dietrich method) (libpyhat.transform.baseline_code.fabc.FABC method) (libpyhat.transform.baseline_code.kajfosz_kwiatek.KajfoszKwiatek method) (libpyhat.transform.baseline_code.median.MedianFilter method) (libpyhat.transform.baseline_code.polyfit.PolyFit method) (libpyhat.transform.baseline_code.rubberband.Rubberband method) parent (gui.util.Modules.Modules attribute) pca_ica_plot() (in module gui.util.plots) peak_area() (in module libpyhat.transform.peak_area) (libpyhat.spectral_data.SpectralData method)

PeakAreas (class in gui.core.PeakAreas) piecewise_ds (class in libpyhat.transform.cal_tran) Plot (class in gui.core.Plot) Plot_ICA_PCA (class in gui.core.Plot_ICA_PCA) plot_spect_change_vars() (gui.core.PlotSpectra.PlotSpectra method) plot_spect_update_list() (gui.core.PlotSpectra.PlotSpectra method) plotFilenamePushButton_clicked() (gui.core.Plot.Plot method) PlotSpectra (class in gui.core.PlotSpectra) PolyFit (class in libpyhat.transform.baseline_code.polyfit) polyfit_baseline() (in module libpyhat.transform.baseline_code.polyfit) polynomial() (in module libpyhat.transform.continuum) predict() (libpyhat.regression.regression.regression method) predictkeys (gui.util.Modules.Modules attribute) prepare_data() (in module gui.core.caltranMethods.caltran_prepare_data) (in module libpyhat.transform.caltran_utils)

Q

Qtickle (class in gui.util.Qtickle)

R

r1080() (in module libpyhat.derived.crism.crism_algs) r1300() (in module libpyhat.derived.crism.crism_algs) r1330() (in module libpyhat.derived.crism.crism_algs) r1506() (in module libpyhat.derived.crism.crism_algs) r1580() (in module libpyhat.derived.m3.m3_algs) r2529() (in module libpyhat.derived.crism.crism_algs) r2780() (in module libpyhat.derived.m3.m3_algs) r3920() (in module libpyhat.derived.crism.crism_algs) r440() (in module libpyhat.derived.crism.crism_algs) r530() (in module libpyhat.derived.crism.crism_algs) r540() (in module libpyhat.derived.m3.m3_algs) r600() (in module libpyhat.derived.crism.crism_algs) r750() (in module libpyhat.derived.m3.m3_algs) r770() (in module libpyhat.derived.crism.crism_algs) r950_750() (in module libpyhat.derived.m3.m3_algs) random() (in module libpyhat.utils.folds) random_folds() (libpyhat.spectral_data.SpectralData method) ratio (class in libpyhat.transform.cal_tran) ratio() (in module libpyhat.utils.utils) rbr() (in module libpyhat.derived.crism.crism_algs) read() (in module libpyhat.IO.io_cube) read_lookupdata() (gui.core.Lookup.Lookup method) read_supercam_fits() (in module libpyhat.IO.io_supercam_pds) ReadChemCamData (class in gui.core.ReadChemCamData) ReadSuperCamData (class in gui.core.ReadSuperCamData) reflectance() (in module libpyhat.derived.utils) refresh() (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) Refresh_Modules_clicked() (gui.core.MainWindow.MainWindow method) refreshLists() (gui.core.RegressionTrain.RegressionTrain method) regression (class in libpyhat.regression.regression) regression() (in module libpyhat.transform.continuum) regressionMethods() (gui.core.CrossValidation.CrossValidation method) (gui.core.RegressionTrain.RegressionTrain method) RegressionPredict (class in gui.core.RegressionPredict) RegressionTrain (class in gui.core.RegressionTrain) remove_baseline() (in module libpyhat.transform.remove_baseline) (libpyhat.spectral_data.SpectralData method) remove_duplicates() (in module libpyhat.regression.local_rmsep) (libpyhat.spectral_data.SpectralData method) remove_empty_spectra() (libpyhat.spectral_data.SpectralData method) remove_field_name() (in module libpyhat.utils.utils) remove_operation (class in gui.core.RemoveRows) remove_rows() (in module libpyhat.utils.utils) (libpyhat.spectral_data.SpectralData method) remove_unnamed() (libpyhat.spectral_data.SpectralData method) RemoveRows (class in gui.core.RemoveRows) RenameColumn (class in gui.core.RenameColumn) RenameData (class in gui.core.RenameData) Resample (class in gui.core.Resample) RestoreTrainedModel (class in gui.core.RestoreTrainedModel) retranslateUi() (gui.ui.About.Ui_Form method) (gui.ui.AboutQt.Ui_AboutQT method) (gui.ui.AirPLS.Ui_Form method) (gui.ui.ALS.Ui_Form method) (gui.ui.ARD.Ui_Form method) (gui.ui.BaselineRemoval.Ui_Form method) (gui.ui.BayesianRidge.Ui_Form method) (gui.ui.CalibrationTransfer.Ui_Form method) (gui.ui.CalibrationTransferCV.Ui_Form method) (gui.ui.caltran_CCA.Ui_Form method) (gui.ui.caltran_cv_CCA.Ui_Form method) (gui.ui.caltran_cv_CCANew.Ui_Form method) (gui.ui.caltran_cv_DS.Ui_Form method) (gui.ui.caltran_cv_ForwardBackward_DS.Ui_Form method) (gui.ui.caltran_cv_IPD_DS.Ui_Form method) (gui.ui.caltran_cv_LASSODS.Ui_Form method) (gui.ui.caltran_cv_PDS.Ui_Form method) (gui.ui.caltran_cv_PDS_PLS.Ui_Form method) (gui.ui.caltran_cv_Ratio.Ui_Form method) (gui.ui.caltran_cv_RidgeDS.Ui_Form method) (gui.ui.caltran_cv_SparseDS.Ui_Form method) (gui.ui.caltran_DS.Ui_Form method) (gui.ui.caltran_ForwardBackward_DS.Ui_Form method) (gui.ui.caltran_IPD_DS.Ui_Form method) (gui.ui.caltran_LASSODS.Ui_Form method) (gui.ui.caltran_PDS.Ui_Form method) (gui.ui.caltran_PDS_PLS.Ui_Form method) (gui.ui.caltran_Ratio.Ui_Form method) (gui.ui.caltran_RidgeDS.Ui_Form method) (gui.ui.caltran_SparseDS.Ui_Form method) (gui.ui.ClassificationTrain.Ui_Form method) (gui.ui.classify_LDA.Ui_Form method) (gui.ui.cluster_KMeans.Ui_Form method) (gui.ui.cluster_Spectral.Ui_Form method) (gui.ui.Clustering.Ui_Form method) (gui.ui.CombineDataSets.Ui_Form method) (gui.ui.CopyDataSets.Ui_Form method) (gui.ui.CrossValidation.Ui_Form method) (gui.ui.cv_ARD.Ui_Form method) (gui.ui.cv_BayesianRidge.Ui_Form method) (gui.ui.cv_ElasticNet.Ui_Form method) (gui.ui.cv_GBR.Ui_Form method) (gui.ui.cv_GP.Ui_Form method) (gui.ui.cv_KRR.Ui_Form method) (gui.ui.cv_LARS.Ui_Form method) (gui.ui.cv_Lasso.Ui_Form method) (gui.ui.cv_LassoLARS.Ui_Form method) (gui.ui.cv_Local.Ui_Form method) (gui.ui.cv_OLS.Ui_Form method) (gui.ui.cv_OMP.Ui_Form method) (gui.ui.cv_PLS.Ui_Form method) (gui.ui.cv_RF.Ui_Form method) (gui.ui.cv_Ridge.Ui_Form method) (gui.ui.cv_SVR.Ui_Form method) (gui.ui.DataTable.Ui_Form method) (gui.ui.Dietrich.Ui_Form method) (gui.ui.DimensionalityReduction.Ui_Form method) (gui.ui.dimred_FastICA.Ui_Form method) (gui.ui.dimred_JADE.Ui_Form method) (gui.ui.dimred_LDA.Ui_Form method) (gui.ui.dimred_LFDA.Ui_Form method) (gui.ui.dimred_LLE.Ui_Form method) (gui.ui.dimred_MNF.Ui_Form method) (gui.ui.dimred_NMF.Ui_Form method) (gui.ui.dimred_NNMF.Ui_Form method) (gui.ui.dimred_PCA.Ui_Form method) (gui.ui.dimred_tSNE.Ui_Form method) (gui.ui.ElasticNet.Ui_Form method) (gui.ui.EndmemberID.Ui_Form method) (gui.ui.FABC.Ui_Form method) (gui.ui.GBR.Ui_Form method) (gui.ui.GP.Ui_Form method) (gui.ui.Interpolation.Ui_Form method) (gui.ui.KK.Ui_Form method) (gui.ui.KRR.Ui_Form method) (gui.ui.LARS.Ui_Form method) (gui.ui.Lasso.Ui_Form method) (gui.ui.LassoLARS.Ui_Form method) (gui.ui.LoadData.Ui_loadData method) (gui.ui.LocalRegression.Ui_Form method) (gui.ui.LocalRMSEP.Ui_Form method) (gui.ui.LocalRMSEPCalc.Ui_Form method) (gui.ui.LocalRMSEPExplore.Ui_Form method) (gui.ui.Lookup.Ui_Form method) (gui.ui.MainWindow.Ui_MainWindow method) (gui.ui.Mario.Ui_Form method) (gui.ui.MaskData.Ui_Form method) (gui.ui.Median.Ui_Form method) (gui.ui.MinInterp.Ui_Form method) (gui.ui.MinSpline.Ui_Form method) (gui.ui.MultiplyByVector.Ui_Form method) (gui.ui.Normalization.Ui_Form method) (gui.ui.OLS.Ui_Form method) (gui.ui.OMP.Ui_Form method) (gui.ui.OutlierIdentify.Ui_Form method) (gui.ui.OutlierRemoval.Ui_Form method) (gui.ui.outliers_IsolationForest.Ui_Form method) (gui.ui.outliers_LOF.Ui_Form method) (gui.ui.OutputFolder.Ui_Form method) (gui.ui.PeakAreas.Ui_Form method) (gui.ui.Plot.Ui_Form method) (gui.ui.Plot_ICA_PCA.Ui_Form method) (gui.ui.PlotSpectra.Ui_Form method) (gui.ui.PLS.Ui_Form method) (gui.ui.Polyfit.Ui_Form method) (gui.ui.RandomForest.Ui_Form method) (gui.ui.ReadChemCamData.Ui_Form method) (gui.ui.ReadSuperCamData.Ui_Form method) (gui.ui.RegressionCV.Ui_Form method) (gui.ui.RegressionPredict.Ui_Form method) (gui.ui.RegressionTrain.Ui_Form method) (gui.ui.RemoveRows.Ui_Form method) (gui.ui.RemoveRows_new.Ui_Form method) (gui.ui.RenameColumn.Ui_Form method) (gui.ui.RenameData.Ui_Form method) (gui.ui.Resample.Ui_Form method) (gui.ui.RestoreRegressionModel.Ui_loadData method) (gui.ui.RestoreTrainedModel.Ui_Form method) (gui.ui.Ridge.Ui_Form method) (gui.ui.Rubberband.Ui_Form method) (gui.ui.SaveRegressionModel.Ui_Form method) (gui.ui.SaveTrainedModel.Ui_Form method) (gui.ui.setShortcuts.Ui_Form method) (gui.ui.ShiftWvl.Ui_Form method) (gui.ui.SpecDeriv.Ui_Form method) (gui.ui.SpectralParameters.Ui_Form method) (gui.ui.SplitDataset.Ui_Form method) (gui.ui.Standardize.Ui_Form method) (gui.ui.StratifiedFolds.Ui_Form method) (gui.ui.SubmodelBlend.Ui_Form method) (gui.ui.SubmodelPredict.Ui_Form method) (gui.ui.SVR.Ui_Form method) (gui.ui.unmix_FCLS.Ui_Form method) (gui.ui.unmix_GBM.Ui_Form method) (gui.ui.unmix_LMM.Ui_Form method) (gui.ui.unmix_NNLS.Ui_Form method) (gui.ui.unmix_UCLS.Ui_Form method) (gui.ui.Unmixing.Ui_Form method) (gui.ui.WaveletSpline.Ui_Form method) (gui.ui.WriteToCSV.Ui_Form method)

RMSE() (in module libpyhat.regression.cv) rowCount() (gui.util.PandasModel.PandasModel method) rows_match() (in module libpyhat.utils.utils) rpeak1() (in module libpyhat.derived.crism.crism_algs) rpeak1_func() (in module libpyhat.derived.crism.crism_funcs) Rubberband (class in libpyhat.transform.baseline_code.rubberband) rubberband_baseline() (in module libpyhat.transform.baseline_code.rubberband) run() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.baselineRemovalMethods.AirPLS.Ui_Form method) (gui.core.baselineRemovalMethods.ALS.Ui_Form method) (gui.core.baselineRemovalMethods.Dietrich.Ui_Form method) (gui.core.baselineRemovalMethods.FABC.Ui_Form method) (gui.core.baselineRemovalMethods.KK.Ui_Form method) (gui.core.baselineRemovalMethods.Median.Ui_Form method) (gui.core.baselineRemovalMethods.MinInterp.Ui_Form method) (gui.core.baselineRemovalMethods.Polyfit.Ui_Form method) (gui.core.baselineRemovalMethods.Rubberband.Ui_Form method) (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.caltranMethods.caltran_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_DS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS_PLS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_SparseDS.Ui_Form method) (gui.core.caltranMethods.caltran_DS.Ui_Form method) (gui.core.caltranMethods.caltran_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_Ratio.Ui_Form method) (gui.core.caltranMethods.caltran_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_SparseDS.Ui_Form method) (gui.core.Clustering.Clustering method) (gui.core.clusteringMethods.cluster_KMeans.Ui_Form method) (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) (gui.core.CombineDataSets.CombineDataSets method) (gui.core.CopyDataSet.CopyDataSet method) (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_LARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_LassoLARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Local.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.crossValidateMethods.cv_SVR.Ui_Form method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_JADE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LLE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_MNF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_NNMF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_PCA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_tSNE.Ui_Form method) (gui.core.EndmemberIdentify.EndmemberIdentify method) (gui.core.LoadData.LoadData method) (gui.core.LocalRegression.LocalRegression method) (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) (gui.core.Lookup.Lookup method) (gui.core.MainWindow.MainWindow method) (gui.core.MaskData.MaskData method) (gui.core.MultiplyByVector.MultiplyByVector method) (gui.core.Normalization.Normalization method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.outlierMethods.outliers_LOF.Ui_Form method) (gui.core.OutputFolder.OutputFolder method) (gui.core.PeakAreas.PeakAreas method) (gui.core.Plot.Plot method) (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) (gui.core.PlotSpectra.PlotSpectra method) (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.LARS.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.LassoLARS.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) (gui.core.regressionMethods.SVR.Ui_Form method) (gui.core.RegressionPredict.RegressionPredict method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.RemoveRows.RemoveRows method) (gui.core.RenameColumn.RenameColumn method) (gui.core.RenameData.RenameData method) (gui.core.Resample.Resample method) (gui.core.RestoreTrainedModel.RestoreTrainedModel method) (gui.core.SaveTrainedModel.SaveTrainedModel method) (gui.core.ShiftWvl.ShiftWvl method) (gui.core.SpecDeriv.SpecDeriv method) (gui.core.SpectralParameters.SpectralParameters method) (gui.core.SplitDataset.SplitDataset method) (gui.core.Standardize.Standardize method) (gui.core.StratifiedFolds.StratifiedFolds method) (gui.core.SubmodelBlend.SubmodelBlend method) (gui.core.Unmixing.Unmixing method) (gui.core.unmixingMethods.unmix_FCLS.Ui_Form method) (gui.core.unmixingMethods.unmix_GBM.Ui_Form method) (gui.core.unmixingMethods.unmix_LMM.Ui_Form method) (gui.core.unmixingMethods.unmix_NNLS.Ui_Form method) (gui.core.unmixingMethods.unmix_UCLS.Ui_Form method) (gui.core.WriteToCSV.WriteToCSV method) (gui.util.Modules.Modules method) (gui.util.Worker.Worker method) run_pyhat_gui module runModules() (gui.core.MainWindow.MainWindow method)

S

s_curve() (in module libpyhat.transform.lra) save_transform() (libpyhat.transform.cal_tran.cal_tran method) SaveTrainedModel (class in gui.core.SaveTrainedModel) scale() (libpyhat.spectral_data.SpectralData method) selectiveGuiRestore() (gui.util.Qtickle.Qtickle method) selectiveSetGuiParams() (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.Clustering.Clustering method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.Unmixing.Unmixing method) (gui.util.Modules.Modules method) set_choices() (gui.core.Lookup.Lookup method) set_fit_request() (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) set_inverse_transform_request() (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) set_predict_request() (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) set_radio_buttons() (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) set_score_request() (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) set_spect_minmax() (gui.core.PlotSpectra.PlotSpectra method) set_transform_request() (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) set_xTitle() (gui.core.Plot.Plot method) (gui.core.PlotSpectra.PlotSpectra method) set_yRange() (gui.core.CrossValidation.CrossValidation method) (gui.core.RegressionTrain.RegressionTrain method) set_yTitle() (gui.core.Plot.Plot method) setComboBox() (gui.util.Modules.Modules static method) setDataLimits() (gui.core.Normalization.Normalization method) setDisabled() (gui.util.Modules.Modules method) setFileName() (gui.core.MainWindow.TitleWindow method) setGuiParams() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.Clustering.Clustering method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.Unmixing.Unmixing method) (gui.util.Modules.Modules method) setHidden() (gui.core.baselineRemovalMethods.AirPLS.Ui_Form method) (gui.core.baselineRemovalMethods.ALS.Ui_Form method) (gui.core.baselineRemovalMethods.Dietrich.Ui_Form method) (gui.core.baselineRemovalMethods.FABC.Ui_Form method) (gui.core.baselineRemovalMethods.KK.Ui_Form method) (gui.core.baselineRemovalMethods.Median.Ui_Form method) (gui.core.baselineRemovalMethods.MinInterp.Ui_Form method) (gui.core.baselineRemovalMethods.Polyfit.Ui_Form method) (gui.core.baselineRemovalMethods.Rubberband.Ui_Form method) (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.caltranMethods.caltran_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_DS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS_PLS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_SparseDS.Ui_Form method) (gui.core.caltranMethods.caltran_DS.Ui_Form method) (gui.core.caltranMethods.caltran_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_Ratio.Ui_Form method) (gui.core.caltranMethods.caltran_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_SparseDS.Ui_Form method) (gui.core.clusteringMethods.cluster_KMeans.Ui_Form method) (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_LARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_LassoLARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Local.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.crossValidateMethods.cv_SVR.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_JADE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LLE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_MNF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_NNMF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_PCA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_tSNE.Ui_Form method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.outlierMethods.outliers_LOF.Ui_Form method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.LARS.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.LassoLARS.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) (gui.core.regressionMethods.SVR.Ui_Form method) (gui.core.SubmodelBlend.SubmodelBlend method) (gui.core.SubmodelBlend.subWidgets method) (gui.core.unmixingMethods.unmix_FCLS.Ui_Form method) (gui.core.unmixingMethods.unmix_GBM.Ui_Form method) (gui.core.unmixingMethods.unmix_LMM.Ui_Form method) (gui.core.unmixingMethods.unmix_NNLS.Ui_Form method) (gui.core.unmixingMethods.unmix_UCLS.Ui_Form method) setLimits() (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.Normalization.norm_range method) setListWidget() (gui.util.Modules.Modules static method) setMainName() (gui.core.MainWindow.TitleWindow method) setParameters() (gui.core.SpectralParameters.SpectralParameters method) setProgressBar() (gui.util.Modules.Modules method) setup() (gui.util.Modules.Modules method) setup_norm_ranges() (gui.core.Normalization.Normalization method) setup_remove_operations() (gui.core.RemoveRows.RemoveRows method) setupModules() (gui.core.MainWindow.MainWindow method) setupUi() (gui.core.BaselineRemoval.BaselineRemoval method) (gui.core.baselineRemovalMethods.AirPLS.Ui_Form method) (gui.core.baselineRemovalMethods.ALS.Ui_Form method) (gui.core.baselineRemovalMethods.Dietrich.Ui_Form method) (gui.core.baselineRemovalMethods.FABC.Ui_Form method) (gui.core.baselineRemovalMethods.KK.Ui_Form method) (gui.core.baselineRemovalMethods.Median.Ui_Form method) (gui.core.baselineRemovalMethods.MinInterp.Ui_Form method) (gui.core.baselineRemovalMethods.Polyfit.Ui_Form method) (gui.core.baselineRemovalMethods.Rubberband.Ui_Form method) (gui.core.baselineRemovalMethods.WaveletSpline.Ui_Form method) (gui.core.CalibrationTransfer.CalibrationTransfer method) (gui.core.CalibrationTransferCV.CalibrationTransferCV method) (gui.core.caltranMethods.caltran_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_CCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_DS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_PDS_PLS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_cv_SparseDS.Ui_Form method) (gui.core.caltranMethods.caltran_DS.Ui_Form method) (gui.core.caltranMethods.caltran_FBDS.Ui_Form method) (gui.core.caltranMethods.caltran_IPDDS.Ui_Form method) (gui.core.caltranMethods.caltran_LASSODS.Ui_Form method) (gui.core.caltranMethods.caltran_NewCCA.Ui_Form method) (gui.core.caltranMethods.caltran_PDS.Ui_Form method) (gui.core.caltranMethods.caltran_Ratio.Ui_Form method) (gui.core.caltranMethods.caltran_RidgeDS.Ui_Form method) (gui.core.caltranMethods.caltran_SparseDS.Ui_Form method) (gui.core.Clustering.Clustering method) (gui.core.clusteringMethods.cluster_KMeans.Ui_Form method) (gui.core.clusteringMethods.cluster_Spectral.Ui_Form method) (gui.core.CombineDataSets.CombineDataSets method) (gui.core.CopyDataSet.CopyDataSet method) (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.crossValidateMethods.cv_ElasticNet.Ui_Form method) (gui.core.crossValidateMethods.cv_GBR.Ui_Form method) (gui.core.crossValidateMethods.cv_GP.Ui_Form method) (gui.core.crossValidateMethods.cv_KRR.Ui_Form method) (gui.core.crossValidateMethods.cv_LARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Lasso.Ui_Form method) (gui.core.crossValidateMethods.cv_LassoLARS.Ui_Form method) (gui.core.crossValidateMethods.cv_Local.Ui_Form method) (gui.core.crossValidateMethods.cv_OLS.Ui_Form method) (gui.core.crossValidateMethods.cv_OMP.Ui_Form method) (gui.core.crossValidateMethods.cv_PLS.Ui_Form method) (gui.core.crossValidateMethods.cv_RF.Ui_Form method) (gui.core.crossValidateMethods.cv_Ridge.Ui_Form method) (gui.core.crossValidateMethods.cv_SVR.Ui_Form method) (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.dimensionalityReductionMethods.dimred_FastICA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_JADE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LLE.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_MNF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_NNMF.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_PCA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_tSNE.Ui_Form method) (gui.core.EndmemberIdentify.EndmemberIdentify method) (gui.core.LoadData.LoadData method) (gui.core.LocalRegression.LocalRegression method) (gui.core.LocalRMSEPCalc.LocalRMSEPCalc method) (gui.core.LocalRMSEPExplore.LocalRMSEPExplore method) (gui.core.Lookup.Lookup method) (gui.core.MainWindow.MainWindow method) (gui.core.MaskData.MaskData method) (gui.core.MultiplyByVector.MultiplyByVector method) (gui.core.Normalization.Normalization method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.outlierMethods.outliers_IsolationForest.Ui_Form method) (gui.core.outlierMethods.outliers_LOF.Ui_Form method) (gui.core.OutputFolder.OutputFolder method) (gui.core.PeakAreas.PeakAreas method) (gui.core.Plot.Plot method) (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method) (gui.core.PlotSpectra.PlotSpectra method) (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ElasticNet.Ui_Form method) (gui.core.regressionMethods.GBR.Ui_Form method) (gui.core.regressionMethods.GP.Ui_Form method) (gui.core.regressionMethods.KRR.Ui_Form method) (gui.core.regressionMethods.LARS.Ui_Form method) (gui.core.regressionMethods.Lasso.Ui_Form method) (gui.core.regressionMethods.LassoLARS.Ui_Form method) (gui.core.regressionMethods.OLS.Ui_Form method) (gui.core.regressionMethods.OMP.Ui_Form method) (gui.core.regressionMethods.PLS.Ui_Form method) (gui.core.regressionMethods.RF.Ui_Form method) (gui.core.regressionMethods.Ridge.Ui_Form method) (gui.core.regressionMethods.SVR.Ui_Form method) (gui.core.RegressionPredict.RegressionPredict method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.RemoveRows.RemoveRows method) (gui.core.RenameColumn.RenameColumn method) (gui.core.RenameData.RenameData method) (gui.core.Resample.Resample method) (gui.core.RestoreTrainedModel.RestoreTrainedModel method) (gui.core.SaveTrainedModel.SaveTrainedModel method) (gui.core.setShortcuts.Ui_Form method) (gui.core.ShiftWvl.ShiftWvl method) (gui.core.SpecDeriv.SpecDeriv method) (gui.core.SpectralParameters.SpectralParameters method) (gui.core.SplitDataset.SplitDataset method) (gui.core.Standardize.Standardize method) (gui.core.StratifiedFolds.StratifiedFolds method) (gui.core.SubmodelBlend.SubmodelBlend method) (gui.core.Unmixing.Unmixing method) (gui.core.unmixingMethods.unmix_FCLS.Ui_Form method) (gui.core.unmixingMethods.unmix_GBM.Ui_Form method) (gui.core.unmixingMethods.unmix_LMM.Ui_Form method) (gui.core.unmixingMethods.unmix_NNLS.Ui_Form method) (gui.core.unmixingMethods.unmix_UCLS.Ui_Form method) (gui.core.WriteToCSV.WriteToCSV method) (gui.ui.About.Ui_Form method) (gui.ui.AboutQt.Ui_AboutQT method) (gui.ui.AirPLS.Ui_Form method) (gui.ui.ALS.Ui_Form method) (gui.ui.ARD.Ui_Form method) (gui.ui.BaselineRemoval.Ui_Form method) (gui.ui.BayesianRidge.Ui_Form method) (gui.ui.CalibrationTransfer.Ui_Form method) (gui.ui.CalibrationTransferCV.Ui_Form method) (gui.ui.caltran_CCA.Ui_Form method) (gui.ui.caltran_cv_CCA.Ui_Form method) (gui.ui.caltran_cv_CCANew.Ui_Form method) (gui.ui.caltran_cv_DS.Ui_Form method) (gui.ui.caltran_cv_ForwardBackward_DS.Ui_Form method) (gui.ui.caltran_cv_IPD_DS.Ui_Form method) (gui.ui.caltran_cv_LASSODS.Ui_Form method) (gui.ui.caltran_cv_PDS.Ui_Form method) (gui.ui.caltran_cv_PDS_PLS.Ui_Form method) (gui.ui.caltran_cv_Ratio.Ui_Form method) (gui.ui.caltran_cv_RidgeDS.Ui_Form method) (gui.ui.caltran_cv_SparseDS.Ui_Form method) (gui.ui.caltran_DS.Ui_Form method) (gui.ui.caltran_ForwardBackward_DS.Ui_Form method) (gui.ui.caltran_IPD_DS.Ui_Form method) (gui.ui.caltran_LASSODS.Ui_Form method) (gui.ui.caltran_PDS.Ui_Form method) (gui.ui.caltran_PDS_PLS.Ui_Form method) (gui.ui.caltran_Ratio.Ui_Form method) (gui.ui.caltran_RidgeDS.Ui_Form method) (gui.ui.caltran_SparseDS.Ui_Form method) (gui.ui.ClassificationTrain.Ui_Form method) (gui.ui.classify_LDA.Ui_Form method) (gui.ui.cluster_KMeans.Ui_Form method) (gui.ui.cluster_Spectral.Ui_Form method) (gui.ui.Clustering.Ui_Form method) (gui.ui.CombineDataSets.Ui_Form method) (gui.ui.CopyDataSets.Ui_Form method) (gui.ui.CrossValidation.Ui_Form method) (gui.ui.cv_ARD.Ui_Form method) (gui.ui.cv_BayesianRidge.Ui_Form method) (gui.ui.cv_ElasticNet.Ui_Form method) (gui.ui.cv_GBR.Ui_Form method) (gui.ui.cv_GP.Ui_Form method) (gui.ui.cv_KRR.Ui_Form method) (gui.ui.cv_LARS.Ui_Form method) (gui.ui.cv_Lasso.Ui_Form method) (gui.ui.cv_LassoLARS.Ui_Form method) (gui.ui.cv_Local.Ui_Form method) (gui.ui.cv_OLS.Ui_Form method) (gui.ui.cv_OMP.Ui_Form method) (gui.ui.cv_PLS.Ui_Form method) (gui.ui.cv_RF.Ui_Form method) (gui.ui.cv_Ridge.Ui_Form method) (gui.ui.cv_SVR.Ui_Form method) (gui.ui.DataTable.Ui_Form method) (gui.ui.Dietrich.Ui_Form method) (gui.ui.DimensionalityReduction.Ui_Form method) (gui.ui.dimred_FastICA.Ui_Form method) (gui.ui.dimred_JADE.Ui_Form method) (gui.ui.dimred_LDA.Ui_Form method) (gui.ui.dimred_LFDA.Ui_Form method) (gui.ui.dimred_LLE.Ui_Form method) (gui.ui.dimred_MNF.Ui_Form method) (gui.ui.dimred_NMF.Ui_Form method) (gui.ui.dimred_NNMF.Ui_Form method) (gui.ui.dimred_PCA.Ui_Form method) (gui.ui.dimred_tSNE.Ui_Form method) (gui.ui.ElasticNet.Ui_Form method) (gui.ui.EndmemberID.Ui_Form method) (gui.ui.FABC.Ui_Form method) (gui.ui.GBR.Ui_Form method) (gui.ui.GP.Ui_Form method) (gui.ui.Interpolation.Ui_Form method) (gui.ui.KK.Ui_Form method) (gui.ui.KRR.Ui_Form method) (gui.ui.LARS.Ui_Form method) (gui.ui.Lasso.Ui_Form method) (gui.ui.LassoLARS.Ui_Form method) (gui.ui.LoadData.Ui_loadData method) (gui.ui.LocalRegression.Ui_Form method) (gui.ui.LocalRMSEP.Ui_Form method) (gui.ui.LocalRMSEPCalc.Ui_Form method) (gui.ui.LocalRMSEPExplore.Ui_Form method) (gui.ui.Lookup.Ui_Form method) (gui.ui.MainWindow.Ui_MainWindow method) (gui.ui.Mario.Ui_Form method) (gui.ui.MaskData.Ui_Form method) (gui.ui.Median.Ui_Form method) (gui.ui.MinInterp.Ui_Form method) (gui.ui.MinSpline.Ui_Form method) (gui.ui.MultiplyByVector.Ui_Form method) (gui.ui.Normalization.Ui_Form method) (gui.ui.OLS.Ui_Form method) (gui.ui.OMP.Ui_Form method) (gui.ui.OutlierIdentify.Ui_Form method) (gui.ui.OutlierRemoval.Ui_Form method) (gui.ui.outliers_IsolationForest.Ui_Form method) (gui.ui.outliers_LOF.Ui_Form method) (gui.ui.OutputFolder.Ui_Form method) (gui.ui.PeakAreas.Ui_Form method) (gui.ui.Plot.Ui_Form method) (gui.ui.Plot_ICA_PCA.Ui_Form method) (gui.ui.PlotSpectra.Ui_Form method) (gui.ui.PLS.Ui_Form method) (gui.ui.Polyfit.Ui_Form method) (gui.ui.RandomForest.Ui_Form method) (gui.ui.ReadChemCamData.Ui_Form method) (gui.ui.ReadSuperCamData.Ui_Form method) (gui.ui.RegressionCV.Ui_Form method) (gui.ui.RegressionPredict.Ui_Form method) (gui.ui.RegressionTrain.Ui_Form method) (gui.ui.RemoveRows.Ui_Form method) (gui.ui.RemoveRows_new.Ui_Form method) (gui.ui.RenameColumn.Ui_Form method) (gui.ui.RenameData.Ui_Form method) (gui.ui.Resample.Ui_Form method) (gui.ui.RestoreRegressionModel.Ui_loadData method) (gui.ui.RestoreTrainedModel.Ui_Form method) (gui.ui.Ridge.Ui_Form method) (gui.ui.Rubberband.Ui_Form method) (gui.ui.SaveRegressionModel.Ui_Form method) (gui.ui.SaveTrainedModel.Ui_Form method) (gui.ui.setShortcuts.Ui_Form method) (gui.ui.ShiftWvl.Ui_Form method) (gui.ui.SpecDeriv.Ui_Form method) (gui.ui.SpectralParameters.Ui_Form method) (gui.ui.SplitDataset.Ui_Form method) (gui.ui.Standardize.Ui_Form method) (gui.ui.StratifiedFolds.Ui_Form method) (gui.ui.SubmodelBlend.Ui_Form method) (gui.ui.SubmodelPredict.Ui_Form method) (gui.ui.SVR.Ui_Form method) (gui.ui.unmix_FCLS.Ui_Form method) (gui.ui.unmix_GBM.Ui_Form method) (gui.ui.unmix_LMM.Ui_Form method) (gui.ui.unmix_NNLS.Ui_Form method) (gui.ui.unmix_UCLS.Ui_Form method) (gui.ui.Unmixing.Ui_Form method) (gui.ui.WaveletSpline.Ui_Form method) (gui.ui.WriteToCSV.Ui_Form method) (gui.util.Modules.Modules method)

setupWidgets() (gui.core.SubmodelBlend.SubmodelBlend method) setValue() (gui.core.Normalization.norm_range method) (gui.core.SubmodelBlend.subWidgets method) setWidgetItems() (gui.core.MainWindow.MainWindow method) sh600_2() (in module libpyhat.derived.crism.crism_algs) sh770() (in module libpyhat.derived.crism.crism_algs) sh_func() (in module libpyhat.derived.crism.crism_funcs) shift() (libpyhat.spectral_data.SpectralData method) shift_spect() (in module libpyhat.transform.shift_spect) ShiftWvl (class in gui.core.ShiftWvl) sindex2() (in module libpyhat.derived.crism.crism_algs) sm (class in libpyhat.regression.sm) SMACC (class in libpyhat.emi.emi) smooth() (libpyhat.transform.baseline_code.common.WhittakerSmoother method) soft() (in module libpyhat.Unmixing.ELMM_ADMM) soft_thresh() (in module libpyhat.transform.caltran_utils) SpecDeriv (class in gui.core.SpecDeriv) spectral_profiler() (in module libpyhat.IO.io_kaguya_sp) SpectralData (class in libpyhat.spectral_data) SpectralParameters (class in gui.core.SpectralParameters) spinBox() (gui.core.SubmodelBlend.subWidgets method) SplitDataset (class in gui.core.SplitDataset) standard_deviation_stretch() (in module libpyhat.transform.stretch) Standardize (class in gui.core.Standardize) strat_fold_change_testfolds() (gui.core.StratifiedFolds.StratifiedFolds method) strat_fold_change_vars() (gui.core.StratifiedFolds.StratifiedFolds method) stratified_folds() (in module libpyhat.utils.folds) (libpyhat.spectral_data.SpectralData method) StratifiedFolds (class in gui.core.StratifiedFolds) SubmodelBlend (class in gui.core.SubmodelBlend) submodels_blend() (libpyhat.regression.sm.sm method) subWidgets (class in gui.core.SubmodelBlend) supercam_batch() (in module libpyhat.IO.io_supercam_pds) svt_thresh() (in module libpyhat.transform.caltran_utils)

T

taskFinished (gui.core.MainWindow.MainWindow attribute) (gui.util.Worker.Worker attribute) test_m3_io() (in module tests.derived.m3.test_m3_io) tests module tests.data module tests.derived module tests.derived.crism module tests.derived.crism.crism_wv module tests.derived.crism.test_crism module tests.derived.m3 module tests.derived.m3.m3_wv module tests.derived.m3.test_m3_io module

tests.derived.m3.test_new module tests.derived.m3.test_pipe module tests.test_utils module textWritten (gui.core.MainWindow.EmittingStream attribute) thermal_ratio() (in module libpyhat.derived.m3.m3_algs) TitleWindow (class in gui.core.MainWindow) toggle_caltran_widget() (gui.core.CalibrationTransferCV.CalibrationTransferCV method) toggle_params() (gui.core.crossValidateMethods.cv_ARD.Ui_Form method) (gui.core.crossValidateMethods.cv_BayesianRidge.Ui_Form method) (gui.core.regressionMethods.ARD.Ui_Form method) (gui.core.regressionMethods.BayesianRidge.Ui_Form method) toggle_pls() (gui.core.caltranMethods.caltran_PDS.Ui_Form method) toggle_regression_widget() (gui.core.CrossValidation.CrossValidation method) transform() (libpyhat.transform.dim_reductions.jade.JADE method) (libpyhat.transform.dim_reductions.lfda.LFDA method) twoum_continuum() (in module libpyhat.derived.m3.m3_funcs) twoum_ratio() (in module libpyhat.derived.m3.m3_algs) twoum_slope() (in module libpyhat.derived.m3.m3_algs)

U

Ui_AboutQT (class in gui.ui.AboutQt) Ui_Form (class in gui.core.baselineRemovalMethods.AirPLS) (class in gui.core.baselineRemovalMethods.ALS) (class in gui.core.baselineRemovalMethods.Dietrich) (class in gui.core.baselineRemovalMethods.FABC) (class in gui.core.baselineRemovalMethods.KK) (class in gui.core.baselineRemovalMethods.Median) (class in gui.core.baselineRemovalMethods.MinInterp) (class in gui.core.baselineRemovalMethods.Polyfit) (class in gui.core.baselineRemovalMethods.Rubberband) (class in gui.core.baselineRemovalMethods.WaveletSpline) (class in gui.core.caltranMethods.caltran_CCA) (class in gui.core.caltranMethods.caltran_cv_CCA) (class in gui.core.caltranMethods.caltran_cv_DS) (class in gui.core.caltranMethods.caltran_cv_FBDS) (class in gui.core.caltranMethods.caltran_cv_IPDDS) (class in gui.core.caltranMethods.caltran_cv_LASSODS) (class in gui.core.caltranMethods.caltran_cv_NewCCA) (class in gui.core.caltranMethods.caltran_cv_PDS) (class in gui.core.caltranMethods.caltran_cv_PDS_PLS) (class in gui.core.caltranMethods.caltran_cv_RidgeDS) (class in gui.core.caltranMethods.caltran_cv_SparseDS) (class in gui.core.caltranMethods.caltran_DS) (class in gui.core.caltranMethods.caltran_FBDS) (class in gui.core.caltranMethods.caltran_IPDDS) (class in gui.core.caltranMethods.caltran_LASSODS) (class in gui.core.caltranMethods.caltran_NewCCA) (class in gui.core.caltranMethods.caltran_PDS) (class in gui.core.caltranMethods.caltran_Ratio) (class in gui.core.caltranMethods.caltran_RidgeDS) (class in gui.core.caltranMethods.caltran_SparseDS) (class in gui.core.clusteringMethods.cluster_KMeans) (class in gui.core.clusteringMethods.cluster_Spectral) (class in gui.core.crossValidateMethods.cv_ARD) (class in gui.core.crossValidateMethods.cv_BayesianRidge) (class in gui.core.crossValidateMethods.cv_ElasticNet) (class in gui.core.crossValidateMethods.cv_GBR) (class in gui.core.crossValidateMethods.cv_GP) (class in gui.core.crossValidateMethods.cv_KRR) (class in gui.core.crossValidateMethods.cv_LARS) (class in gui.core.crossValidateMethods.cv_Lasso) (class in gui.core.crossValidateMethods.cv_LassoLARS) (class in gui.core.crossValidateMethods.cv_Local) (class in gui.core.crossValidateMethods.cv_OLS) (class in gui.core.crossValidateMethods.cv_OMP) (class in gui.core.crossValidateMethods.cv_PLS) (class in gui.core.crossValidateMethods.cv_RF) (class in gui.core.crossValidateMethods.cv_Ridge) (class in gui.core.crossValidateMethods.cv_SVR) (class in gui.core.dimensionalityReductionMethods.dimred_FastICA) (class in gui.core.dimensionalityReductionMethods.dimred_JADE) (class in gui.core.dimensionalityReductionMethods.dimred_LDA) (class in gui.core.dimensionalityReductionMethods.dimred_LFDA) (class in gui.core.dimensionalityReductionMethods.dimred_LLE) (class in gui.core.dimensionalityReductionMethods.dimred_MNF) (class in gui.core.dimensionalityReductionMethods.dimred_NNMF) (class in gui.core.dimensionalityReductionMethods.dimred_PCA) (class in gui.core.dimensionalityReductionMethods.dimred_tSNE) (class in gui.core.outlierMethods.outliers_IsolationForest) (class in gui.core.outlierMethods.outliers_LOF) (class in gui.core.regressionMethods.ARD) (class in gui.core.regressionMethods.BayesianRidge) (class in gui.core.regressionMethods.ElasticNet) (class in gui.core.regressionMethods.GBR) (class in gui.core.regressionMethods.GP) (class in gui.core.regressionMethods.KRR) (class in gui.core.regressionMethods.LARS) (class in gui.core.regressionMethods.Lasso) (class in gui.core.regressionMethods.LassoLARS) (class in gui.core.regressionMethods.OLS) (class in gui.core.regressionMethods.OMP) (class in gui.core.regressionMethods.PLS) (class in gui.core.regressionMethods.RF) (class in gui.core.regressionMethods.Ridge) (class in gui.core.regressionMethods.SVR) (class in gui.core.setShortcuts) (class in gui.core.unmixingMethods.unmix_FCLS) (class in gui.core.unmixingMethods.unmix_GBM) (class in gui.core.unmixingMethods.unmix_LMM) (class in gui.core.unmixingMethods.unmix_NNLS) (class in gui.core.unmixingMethods.unmix_UCLS) (class in gui.ui.About) (class in gui.ui.AirPLS) (class in gui.ui.ALS) (class in gui.ui.ARD) (class in gui.ui.BaselineRemoval) (class in gui.ui.BayesianRidge) (class in gui.ui.CalibrationTransfer) (class in gui.ui.CalibrationTransferCV) (class in gui.ui.caltran_CCA) (class in gui.ui.caltran_cv_CCA) (class in gui.ui.caltran_cv_CCANew) (class in gui.ui.caltran_cv_DS) (class in gui.ui.caltran_cv_ForwardBackward_DS) (class in gui.ui.caltran_cv_IPD_DS) (class in gui.ui.caltran_cv_LASSODS) (class in gui.ui.caltran_cv_PDS) (class in gui.ui.caltran_cv_PDS_PLS) (class in gui.ui.caltran_cv_Ratio) (class in gui.ui.caltran_cv_RidgeDS) (class in gui.ui.caltran_cv_SparseDS) (class in gui.ui.caltran_DS) (class in gui.ui.caltran_ForwardBackward_DS) (class in gui.ui.caltran_IPD_DS) (class in gui.ui.caltran_LASSODS) (class in gui.ui.caltran_PDS) (class in gui.ui.caltran_PDS_PLS) (class in gui.ui.caltran_Ratio) (class in gui.ui.caltran_RidgeDS) (class in gui.ui.caltran_SparseDS) (class in gui.ui.ClassificationTrain) (class in gui.ui.classify_LDA) (class in gui.ui.cluster_KMeans) (class in gui.ui.cluster_Spectral) (class in gui.ui.Clustering) (class in gui.ui.CombineDataSets) (class in gui.ui.CopyDataSets) (class in gui.ui.CrossValidation) (class in gui.ui.cv_ARD) (class in gui.ui.cv_BayesianRidge) (class in gui.ui.cv_ElasticNet) (class in gui.ui.cv_GBR) (class in gui.ui.cv_GP) (class in gui.ui.cv_KRR) (class in gui.ui.cv_LARS) (class in gui.ui.cv_Lasso) (class in gui.ui.cv_LassoLARS) (class in gui.ui.cv_Local) (class in gui.ui.cv_OLS) (class in gui.ui.cv_OMP) (class in gui.ui.cv_PLS) (class in gui.ui.cv_RF) (class in gui.ui.cv_Ridge) (class in gui.ui.cv_SVR) (class in gui.ui.DataTable) (class in gui.ui.Dietrich) (class in gui.ui.DimensionalityReduction) (class in gui.ui.dimred_FastICA) (class in gui.ui.dimred_JADE) (class in gui.ui.dimred_LDA) (class in gui.ui.dimred_LFDA) (class in gui.ui.dimred_LLE) (class in gui.ui.dimred_MNF) (class in gui.ui.dimred_NMF) (class in gui.ui.dimred_NNMF) (class in gui.ui.dimred_PCA) (class in gui.ui.dimred_tSNE) (class in gui.ui.ElasticNet) (class in gui.ui.EndmemberID) (class in gui.ui.FABC) (class in gui.ui.GBR) (class in gui.ui.GP) (class in gui.ui.Interpolation) (class in gui.ui.KK) (class in gui.ui.KRR) (class in gui.ui.LARS) (class in gui.ui.Lasso) (class in gui.ui.LassoLARS) (class in gui.ui.LocalRegression) (class in gui.ui.LocalRMSEP) (class in gui.ui.LocalRMSEPCalc) (class in gui.ui.LocalRMSEPExplore) (class in gui.ui.Lookup) (class in gui.ui.Mario) (class in gui.ui.MaskData) (class in gui.ui.Median) (class in gui.ui.MinInterp) (class in gui.ui.MinSpline) (class in gui.ui.MultiplyByVector) (class in gui.ui.Normalization) (class in gui.ui.OLS) (class in gui.ui.OMP) (class in gui.ui.OutlierIdentify) (class in gui.ui.OutlierRemoval) (class in gui.ui.outliers_IsolationForest) (class in gui.ui.outliers_LOF) (class in gui.ui.OutputFolder) (class in gui.ui.PeakAreas) (class in gui.ui.Plot) (class in gui.ui.Plot_ICA_PCA) (class in gui.ui.PlotSpectra) (class in gui.ui.PLS) (class in gui.ui.Polyfit) (class in gui.ui.RandomForest) (class in gui.ui.ReadChemCamData) (class in gui.ui.ReadSuperCamData) (class in gui.ui.RegressionCV) (class in gui.ui.RegressionPredict) (class in gui.ui.RegressionTrain) (class in gui.ui.RemoveRows) (class in gui.ui.RemoveRows_new) (class in gui.ui.RenameColumn) (class in gui.ui.RenameData) (class in gui.ui.Resample) (class in gui.ui.RestoreTrainedModel) (class in gui.ui.Ridge) (class in gui.ui.Rubberband) (class in gui.ui.SaveRegressionModel) (class in gui.ui.SaveTrainedModel) (class in gui.ui.setShortcuts) (class in gui.ui.ShiftWvl) (class in gui.ui.SpecDeriv) (class in gui.ui.SpectralParameters) (class in gui.ui.SplitDataset) (class in gui.ui.Standardize) (class in gui.ui.StratifiedFolds) (class in gui.ui.SubmodelBlend) (class in gui.ui.SubmodelPredict) (class in gui.ui.SVR) (class in gui.ui.unmix_FCLS) (class in gui.ui.unmix_GBM) (class in gui.ui.unmix_LMM) (class in gui.ui.unmix_NNLS) (class in gui.ui.unmix_UCLS) (class in gui.ui.Unmixing) (class in gui.ui.WaveletSpline) (class in gui.ui.WriteToCSV)

Ui_loadData (class in gui.ui.LoadData) (class in gui.ui.RestoreRegressionModel) Ui_MainWindow (class in gui.ui.MainWindow) undo_L2_norm() (libpyhat.transform.cal_tran.admm_ds method) unmix() (in module libpyhat.Unmixing.unmix) (libpyhat.spectral_data.SpectralData method) (libpyhat.Unmixing.MLM.GBM method) (libpyhat.Unmixing.MLM.LMM method) Unmixing (class in gui.core.Unmixing) unmixingMethods() (gui.core.Unmixing.Unmixing method) update() (gui.core.dimensionalityReductionMethods.dimred_LDA.Ui_Form method) (gui.core.dimensionalityReductionMethods.dimred_LFDA.Ui_Form method) update_cols() (gui.core.RemoveRows.RemoveRows method) update_datakeys() (gui.core.SplitDataset.SplitDataset method) update_LDA() (gui.core.DimensionalityReduction.DimensionalityReduction method) update_list() (gui.core.WriteToCSV.WriteToCSV method) update_lvl0() (gui.core.RenameColumn.RenameColumn method) update_lvl1() (gui.core.RenameColumn.RenameColumn method) update_opt() (gui.core.SubmodelBlend.SubmodelBlend method) update_outfile() (gui.core.ReadChemCamData.ReadChemCamData method) (gui.core.ReadSuperCamData.ReadSuperCamData method) update_split_choices() (gui.core.SplitDataset.SplitDataset method) update_vals() (gui.core.RemoveRows.RemoveRows method) updateVal() (gui.core.Normalization.Normalization method)

V

value_in_array() (in module tests.test_utils) vector_soft_col() (in module libpyhat.Unmixing.ELMM_ADMM)

visnir() (in module libpyhat.derived.m3.m3_algs) visslope() (in module libpyhat.derived.m3.m3_algs)

W

warn_m3() (in module libpyhat.derived.m3.m3_funcs) warn_m3_noisy() (in module libpyhat.derived.m3.m3_funcs) warn_m3_slow() (in module libpyhat.derived.m3.m3_funcs) wave_spline() (in module libpyhat.transform.baseline_code.wavelet_spline) wavelet_a_trous() (in module libpyhat.transform.baseline_code.wavelet_a_trous)

wavelet_spline (class in libpyhat.transform.baseline_code.wavelet_spline) WhittakerSmoother (class in libpyhat.transform.baseline_code.common) Worker (class in gui.util.Worker) write() (gui.core.MainWindow.EmittingStream method) WriteToCSV (class in gui.core.WriteToCSV)

X

xvar_choices() (gui.core.Clustering.Clustering method) (gui.core.CrossValidation.CrossValidation method) (gui.core.EndmemberIdentify.EndmemberIdentify method) (gui.core.LocalRegression.LocalRegression method) (gui.core.Normalization.Normalization method) (gui.core.OutlierIdentify.OutlierIdentify method) (gui.core.PlotSpectra.PlotSpectra method) (gui.core.RegressionTrain.RegressionTrain method) (gui.core.WriteToCSV.WriteToCSV method)

xychoices() (gui.core.Plot_ICA_PCA.Plot_ICA_PCA method)

Y

yvar_choices() (gui.core.CrossValidation.CrossValidation method) (gui.core.DimensionalityReduction.DimensionalityReduction method) (gui.core.LocalRegression.LocalRegression method) (gui.core.RegressionTrain.RegressionTrain method)